Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AL365361.1-201ENST00000566942 3481 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 RNU6-1066P-201ENST00000363573 105 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 Y_RNA.493-201ENST00000384422 102 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 MT-TC-201ENST00000387405 66 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 SNORA40.2-201ENST00000390847 128 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 RNU6-1300P-201ENST00000391046 108 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 RNU2-71P-201ENST00000411395 189 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 Z75741.2-201ENST00000417272 1167 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 DPRXP1-201ENST00000426312 460 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC092393.1-201ENST00000439625 742 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 ELOCP13-201ENST00000443934 329 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 MTCO3P2-201ENST00000457365 171 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC091826.1-201ENST00000514065 313 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC026801.2-201ENST00000515352 425 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 SNORA48.10-201ENST00000516965 160 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 MTCYBP27-201ENST00000555160 670 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 MIR3912-201ENST00000577566 105 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 ELOCP29-201ENST00000588193 334 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 GAS5-AS1-201ENST00000602767 694 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC022509.4-201ENST00000621404 572 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC090772.4-201ENST00000623599 362 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC009039.2-201ENST00000624524 529 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 AC092184.1-201ENST00000625042 715 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 SNORA50A-202ENST00000629536 136 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
UBQLN1Q9UMX0 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 OR5J1P-201ENST00000313544 939 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 RNA5SP295-201ENST00000362655 121 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 RNU6-492P-201ENST00000363035 104 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 snoZ40.1-201ENST00000364540 72 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AL583834.1-201ENST00000406943 343 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AL133384.1-201ENST00000412744 351 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC093155.1-201ENST00000440164 826 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 RPL23AP16-201ENST00000441715 421 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 TRBV26-201ENST00000456572 344 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 RN7SL75P-201ENST00000461926 281 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC092185.1-201ENST00000491371 97 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 KLRA1P-201ENST00000503499 986 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC027309.2-201ENST00000520566 192 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC109635.4-202ENST00000531666 412 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC113368.1-201ENST00000603736 382 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AL160237.3-201ENST00000604114 1013 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC069545.1-201ENST00000605671 358 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC091946.2-201ENST00000606105 291 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC023158.2-201ENST00000614876 543 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AL590240.3-201ENST00000621416 943 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 SCARNA15.3-201ENST00000626315 122 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 SCARNA4.1-201ENST00000628597 123 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC021755.1-201ENST00000559747 1447 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 ZNF734P-201ENST00000419494 1534 ntBASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.07□□□□□ -1.92
UBQLN1Q9UMX0 AC007256.1-201ENST00000392253 2765 ntBASIC3.06□□□□□ -1.92
UBQLN1Q9UMX0 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.06□□□□□ -1.92
UBQLN1Q9UMX0 RNU6-730P-201ENST00000383954 104 ntBASIC3.06□□□□□ -1.92
UBQLN1Q9UMX0 RNU6-1181P-201ENST00000384191 106 ntBASIC3.06□□□□□ -1.92
UBQLN1Q9UMX0 RNU6-837P-201ENST00000391056 108 ntBASIC3.06□□□□□ -1.92
UBQLN1Q9UMX0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBQLN1Q9UMX0 RNU4-78P-201ENST00000410940 126 ntBASIC3.06□□□□□ -1.92
UBQLN1Q9UMX0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms