Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AL031679.1-201ENST00000400616 525 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AL024474.1-201ENST00000404655 591 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 RN7SKP285-201ENST00000410137 318 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AC008065.1-201ENST00000428525 348 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AC002381.1-201ENST00000447049 280 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AL162151.2-201ENST00000448875 158 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 RPL23AP81-201ENST00000455252 467 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 BX322784.1-201ENST00000455793 1077 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 HMGN2P7-201ENST00000456186 273 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 PARP4P3-201ENST00000510265 317 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 RNU2-58P-201ENST00000516403 183 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 RNA5SP49-201ENST00000516450 115 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 RNU6-201P-201ENST00000517100 61 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AC022861.1-201ENST00000522981 663 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AL157394.1-201ENST00000562983 1224 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AL353997.4-201ENST00000586196 166 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 HMGN1P30-201ENST00000589286 268 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 RPL23AP92-201ENST00000603609 255 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AL354984.3-201ENST00000604803 325 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AL590282.1-201ENST00000610379 1136 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AC105429.2-201ENST00000610567 517 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AC002553.4-201ENST00000616896 331 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AC007546.1-201ENST00000619452 559 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 RNU6-156P-201ENST00000621869 107 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AC068880.5-201ENST00000624331 290 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 AC138649.5-201ENST00000637456 137 ntBASIC4.34□□□□□ -1.71
DKK3Q9UBP4 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
DKK3Q9UBP4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 NMD3P1-201ENST00000439704 1488 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 RNU1-14P-201ENST00000362759 152 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 RNU6-525P-201ENST00000363685 104 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 Y_RNA.453-201ENST00000384223 109 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 CALM2P3-201ENST00000400429 449 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 RPS20P2-201ENST00000402520 389 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 RPL7P25-201ENST00000404151 721 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 CCNG1P1-201ENST00000406783 885 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 SPA17P1-201ENST00000416656 452 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 BX295541.1-201ENST00000417774 250 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC069157.1-201ENST00000421749 137 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 HMGB1P31-201ENST00000437242 427 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 RPL17P49-201ENST00000443728 411 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 PPIAP3-201ENST00000450588 505 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 RPL37P6-202ENST00000464216 403 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 PABPC1P3-201ENST00000469174 459 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC012158.1-204ENST00000483430 465 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC105137.1-201ENST00000484355 562 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 ARL4AP2-201ENST00000507378 601 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC006390.1-201ENST00000508068 283 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC034268.2-201ENST00000571784 482 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 DUXAP4-201ENST00000603046 613 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC245014.2-201ENST00000603689 287 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC246785.4-201ENST00000605374 287 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 RNU6-87P-201ENST00000607561 108 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.33□□□□□ -1.72
DKK3Q9UBP4 ZYXP1-201ENST00000617638 118 ntBASIC4.33□□□□□ -1.72
DKK3Q9UBP4 AC006338.1-201ENST00000618453 749 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms