Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 SNORA30B-201ENST00000365319 129 ntBASIC7.41□□□□□ -1.22
RTN4Q9NQC3 SNORD14.1-201ENST00000365609 90 ntBASIC7.41□□□□□ -1.22
RTN4Q9NQC3 RN7SKP236-201ENST00000410635 284 ntBASIC7.41□□□□□ -1.22
RTN4Q9NQC3 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 NIP7P1-201ENST00000433227 512 ntBASIC7.41□□□□□ -1.22
RTN4Q9NQC3 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 AC099670.1-201ENST00000455141 783 ntBASIC7.41□□□□□ -1.22
RTN4Q9NQC3 RNA5SP318-201ENST00000516352 92 ntBASIC7.41□□□□□ -1.22
RTN4Q9NQC3 RNU6-703P-201ENST00000516946 107 ntBASIC7.41□□□□□ -1.22
RTN4Q9NQC3 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 SRGNP1-201ENST00000603392 451 ntBASIC7.41□□□□□ -1.22
RTN4Q9NQC3 BX005040.2-201ENST00000620504 370 ntBASIC7.41□□□□□ -1.22
RTN4Q9NQC3 U4.7-201ENST00000638126 106 ntBASIC7.41□□□□□ -1.22
RTN4Q9NQC3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
RTN4Q9NQC3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 Y_RNA.193-201ENST00000363979 102 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 Y_RNA.645-201ENST00000391229 102 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 MTCYBP2-201ENST00000407745 171 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 U3.37-201ENST00000408528 213 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 RNA5SP239-201ENST00000410218 129 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 AC007365.2-201ENST00000428806 458 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 AC005517.1-201ENST00000452091 489 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 SNORA35.1-201ENST00000458908 128 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 HMGN2P13-201ENST00000476476 274 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 RNU6-612P-201ENST00000516909 102 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 AC103996.1-201ENST00000555468 102 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 LINC00933-203ENST00000559812 219 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 MIR5696-201ENST00000578474 85 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 AC092960.1-201ENST00000604762 351 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 AC111152.1-202ENST00000635848 339 ntBASIC7.4□□□□□ -1.22
RTN4Q9NQC3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RTN4Q9NQC3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RTN4Q9NQC3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
RTN4Q9NQC3 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC7.4□□□□□ -1.23
RTN4Q9NQC3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RTN4Q9NQC3 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 RNA5SP442-201ENST00000365050 107 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 SNORA63.7-201ENST00000365579 123 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 RNU6-72P-201ENST00000384285 79 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AL121835.1-201ENST00000404250 354 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 MRPS18CP6-201ENST00000423587 223 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 HMGB1P12-201ENST00000438594 598 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 TRAPPC2P8-201ENST00000440676 396 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 HIGD1AP2-201ENST00000446367 280 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 RN7SL314P-201ENST00000490735 292 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 RPL23AP80-201ENST00000495605 424 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AP004607.1-201ENST00000524456 203 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AC073916.1-201ENST00000545095 130 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 CHEK2P2-201ENST00000554701 672 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AC015720.2-201ENST00000567709 334 ntBASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC7.39□□□□□ -1.23
RTN4Q9NQC3 AC004584.2-201ENST00000570407 410 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms