Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC091953.2-201ENST00000623979 160 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 MIR6863-201ENST00000636112 90 ntBASIC4.76□□□□□ -1.65
VTA1Q9NP79 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.76□□□□□ -1.65
VTA1Q9NP79 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
VTA1Q9NP79 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 RNU6-989P-201ENST00000362756 107 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 RPS3AP36-201ENST00000398190 775 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 CCDC58P2-201ENST00000417131 366 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 USP9YP36-201ENST00000424581 829 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 FCF1P1-201ENST00000432690 571 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 MTND4LP10-201ENST00000435146 291 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VTA1Q9NP79 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 AC132479.1-201ENST00000449160 144 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 AC079448.1-201ENST00000449377 373 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 AL445433.1-201ENST00000457507 257 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 AC079804.1-201ENST00000461922 436 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 AC091153.1-201ENST00000466297 402 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 AC007182.2-201ENST00000489251 402 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 AC023194.1-201ENST00000493084 308 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 AC104164.2-201ENST00000496953 495 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 AC010587.1-201ENST00000505809 469 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 CR383656.7-201ENST00000548164 174 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 uc_338.12-201ENST00000616344 181 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 AC244517.1-201ENST00000606030 2086 ntBASIC4.75□□□□□ -1.65
VTA1Q9NP79 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
VTA1Q9NP79 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VTA1Q9NP79 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
VTA1Q9NP79 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
VTA1Q9NP79 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VTA1Q9NP79 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
VTA1Q9NP79 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VTA1Q9NP79 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 NOL8P1-201ENST00000508336 3529 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 ELF2P3-201ENST00000445099 1506 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 RNU5A-8P-201ENST00000364102 114 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 RNU6-1078P-201ENST00000364522 103 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 Y_RNA.481-201ENST00000384373 102 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 RNU6-278P-201ENST00000390945 109 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 BTF3P7-201ENST00000407097 488 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 RNU4-55P-201ENST00000410731 137 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 RNA5SP146-201ENST00000410743 123 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 RPL7P2-201ENST00000427639 268 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 AC000111.3-201ENST00000433478 193 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VTA1Q9NP79 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 RN7SL132P-201ENST00000478131 296 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 RPS29P19-201ENST00000479709 171 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 RN7SL817P-201ENST00000480777 288 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 AF213884.1-201ENST00000488102 463 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 AC021146.3-201ENST00000511911 260 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 RNU6-528P-201ENST00000516926 100 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 AC090151.1-201ENST00000520784 730 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 IFITM8P-201ENST00000522529 394 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VTA1Q9NP79 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VTA1Q9NP79 AL512310.1-201ENST00000548639 172 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 RN7SL703P-201ENST00000578485 302 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 AF250324.2-201ENST00000608299 610 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 AC244258.1-201ENST00000637553 1071 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.74□□□□□ -1.65
VTA1Q9NP79 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VTA1Q9NP79 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
VTA1Q9NP79 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.74□□□□□ -1.65
VTA1Q9NP79 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
VTA1Q9NP79 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VTA1Q9NP79 MTCO1P9-201ENST00000505577 1534 ntBASIC4.73□□□□□ -1.65
VTA1Q9NP79 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VTA1Q9NP79 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
VTA1Q9NP79 RNU6-223P-201ENST00000362830 107 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms