Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 RNU6-932P-201ENST00000391108 106 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 MTND3P20-201ENST00000407663 186 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VCX3AQ9NNX9 RPL7P8-201ENST00000411964 730 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC241584.1-201ENST00000438469 1241 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC117440.1-201ENST00000474107 571 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 IGLV3-17-201ENST00000519099 244 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC090502.2-201ENST00000549267 280 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC128657.1-201ENST00000549459 145 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC008127.2-201ENST00000549925 1075 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 LINC00557-201ENST00000563184 1279 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 UBL5P2-201ENST00000583788 219 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC013444.2-201ENST00000603317 787 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 MIR6830-201ENST00000636015 70 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.53□□□□□ -2
VCX3AQ9NNX9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
VCX3AQ9NNX9 AC087359.1-201ENST00000508335 1740 ntBASIC2.53□□□□□ -2
VCX3AQ9NNX9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 OR5BR1P-201ENST00000524992 1330 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 RNU6-839P-201ENST00000363347 108 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 U8.8-201ENST00000365399 135 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC234772.1-201ENST00000377927 937 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 SNORA57.1-201ENST00000391227 145 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AL133264.1-201ENST00000407157 562 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC092634.6-201ENST00000418558 192 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 PSMA6P3-201ENST00000428242 164 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC024082.2-201ENST00000434771 238 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 MTCO1P48-201ENST00000448024 1096 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 snoU13.28-201ENST00000459235 104 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC104164.3-201ENST00000467363 1258 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC126182.1-201ENST00000478134 357 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC109464.2-201ENST00000510242 943 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC026616.1-201ENST00000523157 525 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 MTCO1P47-201ENST00000523889 1271 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 OR5BN1P-201ENST00000532955 829 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC087241.2-201ENST00000535801 324 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 SETP7-201ENST00000552169 453 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 GTF2IP22-201ENST00000554443 182 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 MIR4789-201ENST00000577469 82 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AL137843.1-201ENST00000605078 385 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC018692.3-201ENST00000623929 123 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC079597.1-201ENST00000624306 508 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AL512506.2-201ENST00000624472 458 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AC005336.3-201ENST00000623833 2679 ntBASIC2.52□□□□□ -2.01
VCX3AQ9NNX9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 RNA5SP50-201ENST00000363731 107 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 RNU6-198P-201ENST00000384258 104 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 NPM1P10-201ENST00000398310 865 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 U3.37-201ENST00000408528 213 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC080125.1-201ENST00000414888 684 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 BOLA3P4-201ENST00000418151 400 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 MORF4L1P6-201ENST00000418771 268 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 RPL27AP8-201ENST00000424277 446 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC005019.1-201ENST00000436455 431 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 OR52A4P-202ENST00000481634 799 ntBASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.51□□□□□ -2.01
VCX3AQ9NNX9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms