Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AL121657.1-201ENST00000327215 531 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 RNU6-289P-201ENST00000364093 107 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 SNORA7.2-201ENST00000364446 145 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 SNORD88.1-201ENST00000408684 91 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 RNA5SP317-201ENST00000410176 116 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 RNA5SP311-201ENST00000411290 116 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 RPS7P15-201ENST00000415804 584 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 MTCYBP38-201ENST00000417160 1123 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 MTCO2P21-201ENST00000419780 677 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AL953862.1-201ENST00000423016 168 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 ZYG11AP1-201ENST00000430329 837 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 HMGB1P12-201ENST00000438594 598 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AL117351.1-201ENST00000438864 766 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 HSFY6P-201ENST00000445573 403 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 RPL7P52-201ENST00000449200 742 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 ANKRD26P4-201ENST00000455755 950 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 snoU13.24-201ENST00000458998 104 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 HSPE1P23-201ENST00000509838 286 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 MTCYBP43-201ENST00000513621 740 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 RNA5SP315-201ENST00000516340 116 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 RNA5SP312-201ENST00000517068 116 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 HSPA8P13-201ENST00000523715 472 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AC087465.1-201ENST00000560574 245 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AC053481.3-201ENST00000577881 843 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AL390208.1-201ENST00000605885 644 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AC080013.4-201ENST00000607624 649 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AC140725.3-201ENST00000616193 880 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AL049780.3-201ENST00000624612 1583 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 AC007256.1-201ENST00000392253 2765 ntBASIC3.29□□□□□ -1.88
VIPAS39Q9H9C1 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 RNU6-28P-201ENST00000362378 107 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 RNU6-777P-201ENST00000364265 104 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 SNORA51.2-201ENST00000364595 132 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 RNU6-343P-201ENST00000364709 104 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 RNA5SP51-201ENST00000364750 119 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 RNU6-1181P-201ENST00000384191 106 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 MTCO3P12-201ENST00000416718 547 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AL353705.1-201ENST00000433468 480 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 MUPP-201ENST00000438111 566 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 HMGB1P15-201ENST00000453854 435 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 SUMO2P2-201ENST00000456482 255 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 SNORD105B-201ENST00000458770 79 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AC092754.2-201ENST00000463506 460 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 MTCYBP35-201ENST00000503630 1137 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 HMGB3P15-201ENST00000507326 574 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 FCF1P8-201ENST00000510322 597 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AC108064.1-201ENST00000513791 460 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 MTCO3P13-201ENST00000577757 781 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AC004987.4-201ENST00000603383 338 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AL592221.1-201ENST00000605266 382 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AL133507.1-201ENST00000605269 557 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 MIR7851-201ENST00000610611 160 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 AP000770.2-201ENST00000623694 100 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 MIR6733-201ENST00000635723 61 ntBASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.28□□□□□ -1.88
VIPAS39Q9H9C1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms