Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RPL36AP53-201ENST00000432891 316 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 ELOCP18-201ENST00000434209 337 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AC236972.2-201ENST00000434979 310 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS11Q9H270 AC006480.1-201ENST00000449887 378 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AC010733.1-201ENST00000451515 401 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS11Q9H270 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS11Q9H270 MTND1P12-201ENST00000455231 147 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 Y_RNA.631-201ENST00000459607 101 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AC091868.1-201ENST00000508746 304 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS11Q9H270 Y_RNA.672-201ENST00000516289 104 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 RNU6-445P-201ENST00000516949 107 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS11Q9H270 COX6CP5-201ENST00000527162 228 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AP003385.6-201ENST00000531603 374 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS11Q9H270 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS11Q9H270 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS11Q9H270 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS11Q9H270 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.68□□□□□ -1.66
VPS11Q9H270 MIR3176-201ENST00000582210 90 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS11Q9H270 AC068790.5-201ENST00000602741 355 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 7SK.7-201ENST00000603504 247 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AC016925.2-201ENST00000605108 242 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AC008966.2-201ENST00000606157 453 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.68□□□□□ -1.66
VPS11Q9H270 FAM27B-201ENST00000610601 213 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AL512624.1-201ENST00000613638 469 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 U73479.1-201ENST00000618062 168 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AC009248.2-201ENST00000619826 254 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AC067931.1-201ENST00000624190 671 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS11Q9H270 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS11Q9H270 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS11Q9H270 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
VPS11Q9H270 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS11Q9H270 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS11Q9H270 MTND4P1-201ENST00000457501 1466 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS11Q9H270 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS11Q9H270 AC027290.2-201ENST00000623210 18662 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS11Q9H270 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS11Q9H270 RNU1-39P-201ENST00000383897 165 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 RNU6-74P-201ENST00000384235 107 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
VPS11Q9H270 RNU6-1068P-201ENST00000410958 103 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 RN7SKP216-201ENST00000411050 312 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 RN7SKP140-201ENST00000411196 284 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 AC114755.2-201ENST00000413520 361 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 AC083875.1-201ENST00000419509 405 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 AL589872.1-201ENST00000426602 288 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS11Q9H270 AC133104.1-201ENST00000429100 218 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
VPS11Q9H270 SNRPEP7-201ENST00000438350 220 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 GTF2IP13-201ENST00000438487 386 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 SEPT14P3-201ENST00000439401 183 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 AL732372.2-207ENST00000445840 183 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 SEPT14P2-201ENST00000453405 183 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 MTND5P22-201ENST00000458380 195 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 snoU13.20-201ENST00000459180 104 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 MEMO1P3-201ENST00000459811 302 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 RPS27AP17-201ENST00000463344 455 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 RPS26P39-201ENST00000469206 341 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 AC090096.1-201ENST00000489168 390 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 AC008897.1-201ENST00000494006 347 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 SEPT14P4-201ENST00000513445 186 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 AC017037.2-201ENST00000513850 890 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 RNA5SP92-201ENST00000516437 110 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 AC022861.1-201ENST00000522981 663 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 FO082796.1-201ENST00000523795 183 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS11Q9H270 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS11Q9H270 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS11Q9H270 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS11Q9H270 AC004853.1-201ENST00000604902 698 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS11Q9H270 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS11Q9H270 AC040168.1-201ENST00000623594 991 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.67□□□□□ -1.66
VPS11Q9H270 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS11Q9H270 AC119674.1-207ENST00000641355 633 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS11Q9H270 AC105074.1-201ENST00000623380 3095 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS11Q9H270 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
VPS11Q9H270 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.67□□□□□ -1.66
VPS11Q9H270 AC006378.2-201ENST00000623178 2476 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.67□□□□□ -1.66
VPS11Q9H270 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
VPS11Q9H270 CKAP2P1-201ENST00000555477 2049 ntBASIC4.67□□□□□ -1.66
VPS11Q9H270 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS11Q9H270 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.67□□□□□ -1.66
VPS11Q9H270 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
VPS11Q9H270 AC097504.1-201ENST00000515103 2415 ntBASIC4.66□□□□□ -1.66
VPS11Q9H270 AC018529.3-201ENST00000624212 2254 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms