Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RSPO3Q9BXY4 AC011978.2-201ENST00000569835 2054 ntBASIC2.63□□□□□ -1.99
RSPO3Q9BXY4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
RSPO3Q9BXY4 SEC63P2-201ENST00000503863 1939 ntBASIC2.63□□□□□ -1.99
RSPO3Q9BXY4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.63□□□□□ -1.99
RSPO3Q9BXY4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
RSPO3Q9BXY4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 RNU6-236P-201ENST00000363886 106 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 MIR512-1-201ENST00000384913 84 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 RPL7P27-201ENST00000403775 720 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AL138885.1-201ENST00000405921 675 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 PSMA2P3-201ENST00000429685 675 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC104332.2-201ENST00000429959 156 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 RPL17P49-201ENST00000443728 411 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AL929288.2-201ENST00000446368 407 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 NANOGNBP1-201ENST00000448444 480 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 RPL36AP33-201ENST00000450395 310 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC096992.1-201ENST00000459808 709 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 RN7SL429P-201ENST00000479090 223 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 RN7SL489P-201ENST00000486185 223 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 RN7SL327P-201ENST00000488659 223 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC091860.1-201ENST00000505723 432 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC008837.1-201ENST00000511513 412 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC091826.1-201ENST00000514065 313 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 RNU1-61P-201ENST00000516107 151 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 RNU6-416P-201ENST00000516265 103 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 Y_RNA.717-201ENST00000517106 92 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AL133271.1-201ENST00000538229 291 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AL451007.1-201ENST00000595491 289 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 BNIP3P4-201ENST00000604946 565 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC009237.15-201ENST00000610252 501 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 PART1_2.1-201ENST00000612397 250 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC231759.1-201ENST00000616455 597 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 RN7SL853P-201ENST00000617250 223 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AL158163.2-201ENST00000619110 700 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC123767.1-202ENST00000620407 817 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC090617.7-201ENST00000623952 126 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC006927.4-201ENST00000639187 543 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 OR5BR1P-201ENST00000524992 1330 ntBASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.62□□□□□ -1.99
RSPO3Q9BXY4 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 MIR422A-201ENST00000362286 90 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 SNORA18.3-201ENST00000384122 132 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 RNU2-21P-201ENST00000410368 188 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 RN7SKP123-201ENST00000410732 291 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 RN7SKP284-201ENST00000411002 343 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 RNU6-575P-201ENST00000411326 105 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 RNU2-6P-201ENST00000411404 190 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 MTATP6P20-201ENST00000414147 562 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 MTND4P3-201ENST00000417829 541 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 TOMM22P1-201ENST00000418578 312 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AL139281.1-201ENST00000422120 335 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AC092648.1-201ENST00000425870 423 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AL139132.1-201ENST00000431587 344 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 NANOGP2-201ENST00000435391 727 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AC107083.1-201ENST00000439643 279 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 MTND1P26-201ENST00000440488 538 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AL592437.1-201ENST00000443781 492 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 ELOCP13-201ENST00000443934 329 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AC104687.1-201ENST00000485829 412 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AP001025.2-201ENST00000490908 477 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 RNU6-1073P-201ENST00000517182 106 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AP002404.1-201ENST00000532005 451 ntBASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.61□□□□□ -1.99
RSPO3Q9BXY4 BDH2P1-201ENST00000602288 736 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms