Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AL355596.1-201ENST00000565399 3996 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 CBX3P1-201ENST00000325243 554 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 RNU6-525P-201ENST00000363685 104 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 Y_RNA.402-201ENST00000383972 102 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 snosnR66.1-201ENST00000391095 99 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 MTCO3P40-201ENST00000392516 676 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 CCNG1P1-201ENST00000406783 885 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 SNORA11.2-201ENST00000408318 127 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AL138785.1-201ENST00000425821 331 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AC073614.1-201ENST00000438690 650 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 PGBD4P3-201ENST00000440731 581 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 USP9YP12-201ENST00000450481 570 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AC010683.1-201ENST00000473673 378 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AC019235.1-201ENST00000503847 207 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 RNU6-430P-201ENST00000517078 107 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 CYCSP2-201ENST00000558168 301 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AC005730.3-201ENST00000583067 366 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 MIR5187-201ENST00000583479 76 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AC005255.1-201ENST00000593748 216 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AC087045.1-201ENST00000605856 382 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AL158211.4-201ENST00000606988 584 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AC123768.4-201ENST00000616244 701 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AC007742.2-201ENST00000618226 398 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AL359880.1-201ENST00000621879 266 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AP003122.6-201ENST00000623831 495 ntBASIC4.57□□□□□ -1.68
SALL3Q9BXA9 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SALL3Q9BXA9 AL122126.1-201ENST00000546905 1318 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 Y_RNA.97-201ENST00000363094 102 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 MT-TL1-201ENST00000386347 75 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 RNA5SP424-201ENST00000390988 115 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 GSTA9P-201ENST00000406231 611 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 HSPE1P8-201ENST00000406997 288 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 FCF1P2-201ENST00000415284 583 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 BX890604.2-201ENST00000427883 474 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC092001.1-201ENST00000453012 261 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 NDUFB4P2-201ENST00000509515 391 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 RNA5SP164-201ENST00000516533 110 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 RNU6-358P-201ENST00000516564 75 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 SNORA48.10-201ENST00000516965 160 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AF186190.1-201ENST00000517470 480 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 OR5AP1P-201ENST00000529730 940 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC008011.1-201ENST00000545989 227 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 GLYCAM1-201ENST00000546596 285 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 HSPE1P5-201ENST00000561489 272 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC137800.2-201ENST00000574375 120 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC008752.3-201ENST00000588113 712 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC244505.7-201ENST00000599675 272 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 PRELID3BP8-201ENST00000604148 295 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC009994.1-201ENST00000606889 253 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 CR392039.4-201ENST00000624968 501 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 MIR6863-201ENST00000636112 90 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 MTND1P37-201ENST00000636562 264 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC119744.1-201ENST00000454746 1715 ntBASIC4.56□□□□□ -1.68
SALL3Q9BXA9 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SALL3Q9BXA9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.55□□□□□ -1.68
SALL3Q9BXA9 MTND5P17-201ENST00000418405 1603 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 RNU6-115P-201ENST00000364310 107 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 RNU6-283P-201ENST00000364788 107 ntBASIC4.55□□□□□ -1.68
SALL3Q9BXA9 Y_RNA.296-201ENST00000364930 108 ntBASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms