Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC087241.2-201ENST00000535801 324 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC008083.2-201ENST00000546707 476 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC110588.1-201ENST00000559699 137 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC026464.5-201ENST00000562497 722 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 FRG2DP-202ENST00000566967 323 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC005668.1-201ENST00000571142 476 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 HNRNPCP4-201ENST00000571636 900 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 RNF138P2-201ENST00000603490 592 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC091979.2-201ENST00000607514 214 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 SNORD91B-202ENST00000608459 222 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC091905.2-201ENST00000623143 306 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC119674.1-207ENST00000641355 633 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 AC007390.2-201ENST00000606229 3803 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 SCN1A-220ENST00000641603 12506 ntBASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CDK5RAP1Q96SZ6 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 NACAP2-201ENST00000318548 624 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU5E-1-201ENST00000362477 120 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 Y_RNA.202-201ENST00000364083 110 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 RNA5SP509-201ENST00000364577 119 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 SNORA62-201ENST00000365493 153 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 SNORD116-29-201ENST00000384516 83 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 SNORD115.1-201ENST00000391109 76 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 AC016712.1-201ENST00000431088 378 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 CACYBPP2-201ENST00000453625 678 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 RNU6-261P-201ENST00000459506 102 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 MRPS17P3-201ENST00000465453 385 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 AC017037.1-201ENST00000508460 471 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 PCBP2P3-201ENST00000509726 843 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 IGLVIV-65-201ENST00000517313 360 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 AC027309.2-201ENST00000520566 192 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 Z84480.1-201ENST00000605131 311 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 MIR378J-201ENST00000611988 109 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 AC243773.3-201ENST00000613270 256 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 SALL4P2-201ENST00000423288 2910 ntBASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDK5RAP1Q96SZ6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDK5RAP1Q96SZ6 ERCC6-202ENST00000374127 1782 ntBASIC4.65□□□□□ -1.66
CDK5RAP1Q96SZ6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.65□□□□□ -1.66
CDK5RAP1Q96SZ6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.65□□□□□ -1.66
CDK5RAP1Q96SZ6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDK5RAP1Q96SZ6 Z73965.1-201ENST00000623412 2297 ntBASIC4.65□□□□□ -1.66
CDK5RAP1Q96SZ6 AC074029.4-201ENST00000624796 1859 ntBASIC4.65□□□□□ -1.66
CDK5RAP1Q96SZ6 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDK5RAP1Q96SZ6 MTND5P33-201ENST00000571250 1450 ntBASIC4.65□□□□□ -1.66
CDK5RAP1Q96SZ6 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDK5RAP1Q96SZ6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU4-20P-201ENST00000365601 151 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 Y_RNA.387-201ENST00000383918 102 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 Y_RNA.422-201ENST00000384054 114 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 Y_RNA.445-201ENST00000384168 102 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU2-39P-201ENST00000410604 198 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 RNU4-14P-201ENST00000410858 122 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 RN7SKP140-201ENST00000411196 284 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 TMSB10P2-201ENST00000416049 131 ntBASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP1Q96SZ6 NCOR1P3-201ENST00000420479 303 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms