Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 SNRPGP3-201ENST00000469405 227 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 AC005951.1-201ENST00000576706 485 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 MIR5089-201ENST00000580047 84 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 AC060766.3-201ENST00000591442 263 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 AL589994.2-201ENST00000621124 579 ntBASIC3.21□□□□□ -1.9
IFT140Q96RY7 AC092447.7-201ENST00000422212 1621 ntBASIC3.2□□□□□ -1.9
IFT140Q96RY7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
IFT140Q96RY7 YWHAZP7-201ENST00000436906 631 ntBASIC3.2□□□□□ -1.9
IFT140Q96RY7 AC239798.3-201ENST00000454459 408 ntBASIC3.2□□□□□ -1.9
IFT140Q96RY7 PTGES3P5-201ENST00000455109 434 ntBASIC3.2□□□□□ -1.9
IFT140Q96RY7 AC089999.1-201ENST00000460336 374 ntBASIC3.2□□□□□ -1.9
IFT140Q96RY7 AC090543.1-201ENST00000492168 485 ntBASIC3.2□□□□□ -1.9
IFT140Q96RY7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.2□□□□□ -1.9
IFT140Q96RY7 FAM92A1P1-201ENST00000528023 890 ntBASIC3.2□□□□□ -1.9
IFT140Q96RY7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT140Q96RY7 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC3.2□□□□□ -1.9
IFT140Q96RY7 MAGOH2P-202ENST00000584384 429 ntBASIC3.2□□□□□ -1.9
IFT140Q96RY7 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.2□□□□□ -1.9
IFT140Q96RY7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.19□□□□□ -1.9
IFT140Q96RY7 UBE2V2P1-201ENST00000434717 398 ntBASIC3.19□□□□□ -1.9
IFT140Q96RY7 AC092798.1-201ENST00000458542 409 ntBASIC3.19□□□□□ -1.9
IFT140Q96RY7 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.19□□□□□ -1.9
IFT140Q96RY7 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
IFT140Q96RY7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.19□□□□□ -1.9
IFT140Q96RY7 AP000889.2-201ENST00000532684 490 ntBASIC3.19□□□□□ -1.9
IFT140Q96RY7 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.19□□□□□ -1.9
IFT140Q96RY7 AC073387.2-201ENST00000604797 784 ntBASIC3.19□□□□□ -1.9
IFT140Q96RY7 AL627309.6-201ENST00000606857 840 ntBASIC3.19□□□□□ -1.9
IFT140Q96RY7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.19□□□□□ -1.9
IFT140Q96RY7 RNU1-57P-201ENST00000384491 166 ntBASIC3.18□□□□□ -1.9
IFT140Q96RY7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.18□□□□□ -1.9
IFT140Q96RY7 NF1P5-201ENST00000588287 448 ntBASIC3.18□□□□□ -1.9
IFT140Q96RY7 AP001542.2-201ENST00000593141 364 ntBASIC3.18□□□□□ -1.9
IFT140Q96RY7 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.18□□□□□ -1.9
IFT140Q96RY7 AC132825.8-201ENST00000640783 297 ntBASIC3.18□□□□□ -1.9
IFT140Q96RY7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
IFT140Q96RY7 MIR6073-201ENST00000352083 89 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 RNY1P14-201ENST00000384426 108 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 MIR591-201ENST00000385290 95 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 AL138785.1-201ENST00000425821 331 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 AC104332.2-201ENST00000429959 156 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.17□□□□□ -1.9
IFT140Q96RY7 AL590762.3-201ENST00000436372 640 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 HMGB1P31-201ENST00000437242 427 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 Z73417.1-201ENST00000447373 778 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.17□□□□□ -1.9
IFT140Q96RY7 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.17□□□□□ -1.9
IFT140Q96RY7 Y_RNA.670-201ENST00000516255 105 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 OR8X1P-201ENST00000534542 869 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 SNRPGP19-201ENST00000603826 189 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 AC048347.1-201ENST00000624621 427 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 AC010329.2-201ENST00000595195 2737 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 NR1H5P-201ENST00000452683 1377 ntBASIC3.17□□□□□ -1.9
IFT140Q96RY7 AC245100.2-201ENST00000454544 1679 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 MIR1294-201ENST00000408503 142 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 USP9YP6-201ENST00000413550 854 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.16□□□□□ -1.9
IFT140Q96RY7 SETP8-201ENST00000435341 628 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 CBWD4P-201ENST00000445695 655 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 USP9YP34-201ENST00000453983 808 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
IFT140Q96RY7 AC098583.1-201ENST00000480875 255 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 AC034268.2-201ENST00000571784 482 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 BX248123.2-201ENST00000606318 124 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 AC016877.3-201ENST00000606778 504 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
IFT140Q96RY7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
IFT140Q96RY7 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
IFT140Q96RY7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.16□□□□□ -1.9
IFT140Q96RY7 MTCO3P21-201ENST00000430791 643 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 RPL21P2-201ENST00000440049 481 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 SNRPFP2-201ENST00000440710 251 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 AL353093.1-201ENST00000441292 436 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 CDC42P1-201ENST00000456658 548 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 MTAPP1-201ENST00000489154 819 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 AC025881.1-201ENST00000518851 512 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 SNORA4-201ENST00000584302 138 ntBASIC3.16□□□□□ -1.9
IFT140Q96RY7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
IFT140Q96RY7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
IFT140Q96RY7 SNORA26.7-201ENST00000391288 122 ntBASIC3.15□□□□□ -1.91
IFT140Q96RY7 RNU2-68P-201ENST00000410878 191 ntBASIC3.15□□□□□ -1.91
IFT140Q96RY7 RPS7P9-201ENST00000414704 586 ntBASIC3.15□□□□□ -1.91
IFT140Q96RY7 MTCO3P30-201ENST00000426425 670 ntBASIC3.15□□□□□ -1.91
IFT140Q96RY7 SAR1AP4-201ENST00000429225 591 ntBASIC3.15□□□□□ -1.91
IFT140Q96RY7 HMGB1P27-201ENST00000431429 603 ntBASIC3.15□□□□□ -1.91
IFT140Q96RY7 RPL23AP20-201ENST00000447965 421 ntBASIC3.15□□□□□ -1.91
IFT140Q96RY7 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.15□□□□□ -1.91
IFT140Q96RY7 IGLV3-17-201ENST00000519099 244 ntBASIC3.15□□□□□ -1.91
IFT140Q96RY7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.15□□□□□ -1.91
IFT140Q96RY7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
IFT140Q96RY7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
IFT140Q96RY7 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
IFT140Q96RY7 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
IFT140Q96RY7 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.14□□□□□ -1.91
IFT140Q96RY7 ATP5F1P1-201ENST00000433775 569 ntBASIC3.14□□□□□ -1.91
IFT140Q96RY7 TVP23BP2-201ENST00000455082 615 ntBASIC3.14□□□□□ -1.91
IFT140Q96RY7 AC006483.1-201ENST00000487308 313 ntBASIC3.14□□□□□ -1.91
IFT140Q96RY7 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.14□□□□□ -1.91
IFT140Q96RY7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.14□□□□□ -1.91
IFT140Q96RY7 COX6CP5-201ENST00000527162 228 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms