Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC008489.1-201ENST00000524271 483 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AP003181.2-201ENST00000528941 181 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 TOMM20P2-201ENST00000540082 421 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 CCNG2P1-201ENST00000549521 1000 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 MED28P6-201ENST00000558776 231 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC137800.2-201ENST00000574375 120 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 MIR3118-1-201ENST00000581787 76 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC103987.3-201ENST00000582071 292 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC108747.1-201ENST00000609508 535 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC245517.5-201ENST00000611529 162 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC009509.4-201ENST00000619202 509 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AC140479.6-201ENST00000633535 357 ntBASIC4.21□□□□□ -1.74
CCDC138Q96M89 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
CCDC138Q96M89 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCDC138Q96M89 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC138Q96M89 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 GABPAP-201ENST00000419271 1356 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 RNU6-50P-201ENST00000362356 103 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 OR6C69P-201ENST00000394268 893 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 AL109755.1-201ENST00000401791 649 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC138Q96M89 RNA5SP129-201ENST00000410276 118 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 RNU2-8P-201ENST00000410727 190 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 RPS23P10-201ENST00000416185 486 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 AL022238.1-201ENST00000442557 355 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 RPL21P89-201ENST00000444021 467 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC138Q96M89 RPL23AP81-201ENST00000455252 467 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 RPL23AP24-201ENST00000458203 385 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 MTND1P3-201ENST00000484956 952 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC138Q96M89 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 NDUFB4P2-201ENST00000509515 391 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 Y_RNA.672-201ENST00000516289 104 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 RNA5SP468-201ENST00000516782 93 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 SNORA31.22-201ENST00000517204 135 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 AC107934.1-201ENST00000522215 217 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 IGKV2D-19-201ENST00000523346 262 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 DEFB108A-201ENST00000530110 222 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 AL109766.1-201ENST00000555080 552 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 AC110741.2-201ENST00000605278 268 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 HMGB1P50-201ENST00000605814 607 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 AC103710.1-201ENST00000610003 901 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 AC100793.4-201ENST00000613683 429 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 TUG1_2.1-201ENST00000614234 87 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 AC008121.2-201ENST00000614647 523 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 MIR6758-201ENST00000620653 63 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 AC091953.2-201ENST00000623979 160 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 AC139792.2-201ENST00000624218 587 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 AC011944.2-201ENST00000624440 683 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC138Q96M89 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC138Q96M89 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CCDC138Q96M89 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CCDC138Q96M89 AL133383.2-201ENST00000622958 2336 ntBASIC4.2□□□□□ -1.74
CCDC138Q96M89 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC138Q96M89 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC138Q96M89 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC138Q96M89 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC138Q96M89 DEFB108F-201ENST00000344638 222 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC016397.1-201ENST00000412463 242 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC007899.1-201ENST00000412776 775 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 UBE2FP1-201ENST00000416536 447 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 AL161631.1-201ENST00000417933 486 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 RPS29P17-201ENST00000430795 166 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC138Q96M89 HMGB1P12-201ENST00000438594 598 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 RPL23AP52-201ENST00000439311 478 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 ELOCP30-201ENST00000447108 299 ntBASIC4.19□□□□□ -1.74
CCDC138Q96M89 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms