Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 HMGB1P15-201ENST00000453854 435 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 DHFRP3-201ENST00000455595 559 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AC023194.1-201ENST00000493084 308 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AC108145.1-201ENST00000503770 153 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC4Q92889 PARP4P3-201ENST00000510265 317 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.88□□□□□ -1.63
ERCC4Q92889 RNU6-875P-201ENST00000516488 106 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC4Q92889 IFITM8P-201ENST00000522529 394 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 PHBP17-201ENST00000528576 541 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC4Q92889 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC4Q92889 AL356432.3-201ENST00000568952 465 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.88□□□□□ -1.63
ERCC4Q92889 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.88□□□□□ -1.63
ERCC4Q92889 UBE2L4-201ENST00000587688 464 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.88□□□□□ -1.63
ERCC4Q92889 AL117336.2-201ENST00000602435 335 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AL356055.1-201ENST00000602528 446 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AL035413.2-201ENST00000604801 525 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.88□□□□□ -1.63
ERCC4Q92889 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.88□□□□□ -1.63
ERCC4Q92889 MIR7703-201ENST00000620784 77 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 AL158801.5-201ENST00000623123 465 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.88□□□□□ -1.63
ERCC4Q92889 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
ERCC4Q92889 AC022893.2-201ENST00000564832 3296 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ERCC4Q92889 AL354685.2-201ENST00000448218 1447 ntBASIC4.88□□□□□ -1.63
ERCC4Q92889 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.87□□□□□ -1.63
ERCC4Q92889 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ERCC4Q92889 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
ERCC4Q92889 SNORD113.2-201ENST00000364166 89 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 Y_RNA.234-201ENST00000364409 97 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
ERCC4Q92889 RNU6-877P-201ENST00000383868 107 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 RPS16P5-201ENST00000406501 404 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 RNA5SP239-201ENST00000410218 129 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 ZNF90P2-204ENST00000419323 1075 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 AL391219.1-201ENST00000422570 483 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.87□□□□□ -1.63
ERCC4Q92889 PSMA6P3-201ENST00000428242 164 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.87□□□□□ -1.63
ERCC4Q92889 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC4Q92889 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.87□□□□□ -1.63
ERCC4Q92889 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC4Q92889 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC4Q92889 CALM1P1-201ENST00000442082 433 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 AL451050.1-201ENST00000450126 415 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 AL645939.1-201ENST00000453429 797 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 RNU6-420P-201ENST00000458780 107 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 RPL36AP51-201ENST00000487216 318 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 RPL23AP72-201ENST00000492447 435 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 HMGB1P21-201ENST00000502313 581 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 AC008628.2-201ENST00000502605 298 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.87□□□□□ -1.63
ERCC4Q92889 NPM1P41-201ENST00000512920 831 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC4Q92889 AF235103.2-201ENST00000525753 346 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 AP006289.1-201ENST00000538089 277 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC4Q92889 AC092470.1-201ENST00000546187 132 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.87□□□□□ -1.63
ERCC4Q92889 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC4Q92889 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC4Q92889 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.87□□□□□ -1.63
ERCC4Q92889 MIR4330-201ENST00000579077 105 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC4Q92889 RN7SL690P-201ENST00000582087 240 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.87□□□□□ -1.63
ERCC4Q92889 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.87□□□□□ -1.63
ERCC4Q92889 AC121334.2-201ENST00000605387 271 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.87□□□□□ -1.63
ERCC4Q92889 AC093788.1-201ENST00000609356 927 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ERCC4Q92889 MIR4727-201ENST00000622232 55 ntBASIC4.87□□□□□ -1.63
ERCC4Q92889 FER-210ENST00000628534 558 ntTSL 5 BASIC4.87□□□□□ -1.63
ERCC4Q92889 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
ERCC4Q92889 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.87□□□□□ -1.63
ERCC4Q92889 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ERCC4Q92889 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.86□□□□□ -1.63
ERCC4Q92889 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ERCC4Q92889 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.86□□□□□ -1.63
ERCC4Q92889 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.86□□□□□ -1.63
ERCC4Q92889 Y_RNA.11-201ENST00000362375 109 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 RNA5SP258-201ENST00000362750 119 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 Y_RNA.61-201ENST00000362835 102 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 RNA5SP443-201ENST00000363083 132 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 RNU6-1322P-201ENST00000364309 107 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 RNU6-359P-201ENST00000365466 108 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ERCC4Q92889 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
ERCC4Q92889 RPS4XP8-201ENST00000402039 771 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 RPL26P29-201ENST00000415623 438 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 TMSB10P2-201ENST00000416049 131 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 RPL21P111-201ENST00000418453 477 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 AC069213.2-201ENST00000420238 366 ntBASIC4.86□□□□□ -1.63
ERCC4Q92889 SNRPEP10-201ENST00000420249 274 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms