Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AC010625.1-201ENST00000511296 403 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AC091826.1-201ENST00000514065 313 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 GMPSP1-201ENST00000514075 579 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 SNORA48.9-201ENST00000516419 162 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AC103810.1-201ENST00000579873 453 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 MIR5195-201ENST00000583555 115 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AL035413.2-201ENST00000604801 525 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AC012468.1-201ENST00000604888 430 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AP002826.1-201ENST00000608835 315 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AC104307.1-201ENST00000616142 196 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AC098679.5-201ENST00000624394 571 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 MFSD8-245ENST00000641743 948 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 AC135776.4-201ENST00000624300 1904 ntBASIC2.7□□□□□ -1.98
CLHC1Q8NHS4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 MIR491-201ENST00000384877 84 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AL356057.1-202ENST00000402263 756 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 MTND4LP7-201ENST00000431728 294 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 RPL23AP11-201ENST00000475260 469 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AP001025.2-201ENST00000490908 477 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 SNORA70.16-201ENST00000516390 95 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 SNORA31.21-201ENST00000517180 77 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 HPRT1P3-201ENST00000539521 576 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AC107016.2-201ENST00000547968 190 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 EEF1B2P4-201ENST00000551398 348 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AC011260.1-201ENST00000578420 472 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AC012493.2-201ENST00000595083 291 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AL161756.2-201ENST00000604597 246 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AC245517.5-201ENST00000611529 162 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 SNHG22-203ENST00000617833 660 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AC027309.3-201ENST00000623419 351 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 CYP3A51P-201ENST00000633513 256 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 AC000403.1-201ENST00000613696 3585 ntBASIC2.69□□□□□ -1.98
CLHC1Q8NHS4 FAM35BP-202ENST00000497389 3337 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 SNORD82-201ENST00000365530 70 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 U3.29-201ENST00000391296 212 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AL009174.1-201ENST00000426577 416 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 MUPP-201ENST00000438111 566 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 RNF2P1-201ENST00000442955 1010 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AC112492.1-201ENST00000449607 712 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 TRBV26-201ENST00000456572 344 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 snoU109.4-201ENST00000458953 143 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 RPS29P26-201ENST00000477483 171 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 RPL23AP70-201ENST00000483361 460 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 RPS15AP34-201ENST00000487776 387 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 CDC42P4-201ENST00000510507 563 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 OR5BM1P-201ENST00000512021 366 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 RNA5SP341-201ENST00000516261 117 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AP002404.1-201ENST00000532005 451 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AP000857.1-201ENST00000532151 543 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AC104229.1-201ENST00000561364 255 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 AC006504.3-201ENST00000586818 523 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 ZNF861P-201ENST00000588126 639 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 RPL12P50-201ENST00000603116 116 ntBASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.68□□□□□ -1.98
CLHC1Q8NHS4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms