Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.61□□□□□ -1.99
XRN1Q8IZH2 RPS3AP4-201ENST00000555161 764 ntBASIC2.61□□□□□ -1.99
XRN1Q8IZH2 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.61□□□□□ -1.99
XRN1Q8IZH2 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2.61□□□□□ -1.99
XRN1Q8IZH2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.61□□□□□ -1.99
XRN1Q8IZH2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.61□□□□□ -1.99
XRN1Q8IZH2 OR1S1-201ENST00000624470 978 ntBASIC2.61□□□□□ -1.99
XRN1Q8IZH2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
XRN1Q8IZH2 HMGB1P13-201ENST00000406019 642 ntBASIC2.6□□□□□ -1.99
XRN1Q8IZH2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.6□□□□□ -1.99
XRN1Q8IZH2 FNDC3CP-201ENST00000420795 1155 ntBASIC2.6□□□□□ -1.99
XRN1Q8IZH2 UBE2V2P1-201ENST00000434717 398 ntBASIC2.6□□□□□ -1.99
XRN1Q8IZH2 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC2.6□□□□□ -1.99
XRN1Q8IZH2 HMGB1P31-201ENST00000437242 427 ntBASIC2.6□□□□□ -1.99
XRN1Q8IZH2 AC089999.1-201ENST00000460336 374 ntBASIC2.6□□□□□ -1.99
XRN1Q8IZH2 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.6□□□□□ -1.99
XRN1Q8IZH2 TMEM248P1-201ENST00000510579 951 ntBASIC2.6□□□□□ -1.99
XRN1Q8IZH2 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
XRN1Q8IZH2 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.6□□□□□ -1.99
XRN1Q8IZH2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.6□□□□□ -1.99
XRN1Q8IZH2 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.6□□□□□ -1.99
XRN1Q8IZH2 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
XRN1Q8IZH2 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.6□□□□□ -1.99
XRN1Q8IZH2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.6□□□□□ -1.99
XRN1Q8IZH2 AP001486.2-201ENST00000561652 5113 ntBASIC2.6□□□□□ -1.99
XRN1Q8IZH2 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
XRN1Q8IZH2 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
XRN1Q8IZH2 Y_RNA.269-201ENST00000364685 89 ntBASIC2.59□□□□□ -1.99
XRN1Q8IZH2 RPL23AP39-201ENST00000415533 405 ntBASIC2.59□□□□□ -1.99
XRN1Q8IZH2 AC009414.1-201ENST00000427200 443 ntBASIC2.59□□□□□ -1.99
XRN1Q8IZH2 RPL7P5-201ENST00000471472 736 ntBASIC2.59□□□□□ -1.99
XRN1Q8IZH2 OR8X1P-201ENST00000534542 869 ntBASIC2.59□□□□□ -1.99
XRN1Q8IZH2 SUB1P3-201ENST00000564581 315 ntBASIC2.59□□□□□ -1.99
XRN1Q8IZH2 AC103810.1-201ENST00000579873 453 ntBASIC2.59□□□□□ -1.99
XRN1Q8IZH2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.59□□□□□ -1.99
XRN1Q8IZH2 AC005539.1-201ENST00000443768 1479 ntBASIC2.59□□□□□ -1.99
XRN1Q8IZH2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
XRN1Q8IZH2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
XRN1Q8IZH2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.59□□□□□ -1.99
XRN1Q8IZH2 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
XRN1Q8IZH2 AL139276.1-201ENST00000311910 1001 ntBASIC2.59□□□□□ -2
XRN1Q8IZH2 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.59□□□□□ -2
XRN1Q8IZH2 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.59□□□□□ -2
XRN1Q8IZH2 AC006483.1-201ENST00000487308 313 ntBASIC2.59□□□□□ -2
XRN1Q8IZH2 COX6CP5-201ENST00000527162 228 ntBASIC2.59□□□□□ -2
XRN1Q8IZH2 PRELID2P1-201ENST00000552837 301 ntBASIC2.59□□□□□ -2
XRN1Q8IZH2 OR4T1P-201ENST00000554933 911 ntBASIC2.59□□□□□ -2
XRN1Q8IZH2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.59□□□□□ -2
XRN1Q8IZH2 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
XRN1Q8IZH2 API5P2-201ENST00000397055 1498 ntBASIC2.58□□□□□ -2
XRN1Q8IZH2 Y_RNA.40-201ENST00000362645 93 ntBASIC2.58□□□□□ -2
XRN1Q8IZH2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.58□□□□□ -2
XRN1Q8IZH2 AC011753.1-201ENST00000451001 220 ntBASIC2.58□□□□□ -2
XRN1Q8IZH2 AC239798.3-201ENST00000454459 408 ntBASIC2.58□□□□□ -2
XRN1Q8IZH2 RNU6-717P-201ENST00000459076 104 ntBASIC2.58□□□□□ -2
XRN1Q8IZH2 SNRPGP3-201ENST00000469405 227 ntBASIC2.58□□□□□ -2
XRN1Q8IZH2 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.58□□□□□ -2
XRN1Q8IZH2 SNORA25.15-201ENST00000516487 89 ntBASIC2.58□□□□□ -2
XRN1Q8IZH2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.58□□□□□ -2
XRN1Q8IZH2 OR4P1P-201ENST00000530808 1136 ntBASIC2.58□□□□□ -2
XRN1Q8IZH2 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.58□□□□□ -2
XRN1Q8IZH2 AC091046.2-201ENST00000620775 665 ntBASIC2.58□□□□□ -2
XRN1Q8IZH2 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.58□□□□□ -2
XRN1Q8IZH2 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.58□□□□□ -2
XRN1Q8IZH2 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.58□□□□□ -2
XRN1Q8IZH2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
XRN1Q8IZH2 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
XRN1Q8IZH2 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
XRN1Q8IZH2 RNU7-95P-201ENST00000459222 64 ntBASIC2.57□□□□□ -2
XRN1Q8IZH2 RPS29P12-201ENST00000460178 152 ntBASIC2.57□□□□□ -2
XRN1Q8IZH2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
XRN1Q8IZH2 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.57□□□□□ -2
XRN1Q8IZH2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
XRN1Q8IZH2 AC010329.2-201ENST00000595195 2737 ntBASIC2.57□□□□□ -2
XRN1Q8IZH2 RNU2-17P-201ENST00000410290 190 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.56□□□□□ -2
XRN1Q8IZH2 AL590762.3-201ENST00000436372 640 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 AC104564.1-201ENST00000493028 407 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.56□□□□□ -2
XRN1Q8IZH2 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.56□□□□□ -2
XRN1Q8IZH2 AC020895.1-201ENST00000595362 272 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 AC009314.1-201ENST00000603871 304 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 AL589994.2-201ENST00000621124 579 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.56□□□□□ -2
XRN1Q8IZH2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
XRN1Q8IZH2 AC012321.1-201ENST00000561622 1588 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 RNU6-146P-201ENST00000384602 108 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 AP000275.1-201ENST00000411943 390 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 RPL7P46-201ENST00000425129 740 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 NEK4P1-201ENST00000433383 879 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 SETP8-201ENST00000435341 628 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 RPS7P5-201ENST00000441482 581 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 RPL23AP20-201ENST00000447965 421 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.56□□□□□ -2
XRN1Q8IZH2 PTGES3P5-201ENST00000455109 434 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 CDC42P1-201ENST00000456658 548 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 AL163540.1-201ENST00000485382 386 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 AC078918.1-201ENST00000498515 228 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 MLLT10P2-201ENST00000506434 249 ntBASIC2.56□□□□□ -2
XRN1Q8IZH2 RN7SKP96-201ENST00000516948 297 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms