Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC093591.1-201ENST00000491435 481 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 RPL21P129-201ENST00000491732 478 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 AC104629.1-201ENST00000494226 508 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 RPL21P16-201ENST00000495531 483 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 SUMO2P5-201ENST00000506790 245 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 NDUFS5P6-201ENST00000529136 295 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 AC104072.1-201ENST00000568817 668 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 MIR3670-2-201ENST00000582974 65 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 MIR3670-1-201ENST00000584160 65 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 MIR3670-3-201ENST00000584855 65 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 AP001330.4-201ENST00000604350 154 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 AP002802.2-201ENST00000605877 235 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 MIR3670-4-201ENST00000612260 65 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC50Q8IVM0 DBF4P1-201ENST00000412976 1892 ntBASIC3.09□□□□□ -1.92
CCDC50Q8IVM0 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.09□□□□□ -1.92
CCDC50Q8IVM0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AL049780.3-201ENST00000624612 1583 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 SUGT1P1-201ENST00000379514 476 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 RNU6-1074P-201ENST00000383995 104 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AL079342.2-201ENST00000403367 482 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 U3.42-201ENST00000408746 214 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AL158156.1-201ENST00000422509 473 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 UBE2D3P2-201ENST00000424409 445 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 MTCYBP42-201ENST00000444653 1130 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 VN1R10P-201ENST00000447106 875 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC079776.3-201ENST00000450665 370 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 BX510359.1-201ENST00000456973 237 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC092757.1-201ENST00000467293 467 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC117440.1-201ENST00000474107 571 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 SNORD59.2-201ENST00000516873 68 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC009812.2-201ENST00000517657 457 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 FAM60DP-201ENST00000524174 632 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 EEF1B2P4-201ENST00000551398 348 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC138915.2-201ENST00000569776 97 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC126365.2-201ENST00000580630 379 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 MIR4444-1-201ENST00000581696 74 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 MIR4444-2-201ENST00000584390 74 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AL031985.2-201ENST00000600955 480 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC069200.1-201ENST00000609511 323 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AL020991.1-201ENST00000612314 373 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC002076.2-201ENST00000617362 122 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC092650.2-201ENST00000619984 902 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC006249.1-201ENST00000621223 471 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AL157770.1-201ENST00000623049 439 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC095031.1-201ENST00000623685 672 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 OR8B1P-202ENST00000641132 1178 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 AC116096.1-201ENST00000566804 2314 ntBASIC3.08□□□□□ -1.92
CCDC50Q8IVM0 OR5H2-201ENST00000355273 945 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 RNU6-50P-201ENST00000362356 103 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 VTRNA1-1-201ENST00000363120 99 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 RNA5SP171-201ENST00000391071 115 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 USP9YP21-201ENST00000420603 432 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 AL162389.1-201ENST00000449233 177 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 AP001025.2-201ENST00000490908 477 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 BOLA3P3-201ENST00000505182 232 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 MTND5P4-201ENST00000514978 288 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 MTCYBP27-201ENST00000555160 670 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 AC015871.2-201ENST00000603605 948 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 AL110115.1-201ENST00000614396 364 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 AC068831.7-201ENST00000616954 363 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 AL353748.2-201ENST00000622148 471 ntBASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC50Q8IVM0 CYP3A51P-201ENST00000633513 256 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 158.4 ms