Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC023043.2-201ENST00000589678 1026 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC004805.2-201ENST00000605382 482 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 AP005432.2-201ENST00000608162 586 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC091905.4-201ENST00000623432 202 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 INTS6P1-201ENST00000504674 2530 ntBASIC5.37□□□□□ -1.55
RNF43Q68DV7 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF43Q68DV7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF43Q68DV7 AC244517.1-201ENST00000606030 2086 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF43Q68DV7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF43Q68DV7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF43Q68DV7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF43Q68DV7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 SNURFL-201ENST00000309296 343 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 AL161781.1-201ENST00000354277 403 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 RN7SKP104-201ENST00000362605 328 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 RNA5SP90-201ENST00000364801 99 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 Y_RNA.288-201ENST00000364854 92 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 SNORD116-11-201ENST00000383882 92 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 RNU6-444P-201ENST00000383988 108 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 MIR558-201ENST00000384920 94 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 HSPA8P15-201ENST00000401676 786 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 NDUFS5P1-201ENST00000405668 289 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 RN7SKP16-201ENST00000410180 299 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF43Q68DV7 AL591848.1-201ENST00000413092 322 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 DDX39BP1-205ENST00000422507 192 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 RAC1P6-201ENST00000423911 575 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 OR2AS1P-201ENST00000427827 319 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 PSMA6P3-201ENST00000428242 164 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF43Q68DV7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 AC093156.1-201ENST00000440382 670 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 SNRPFP3-201ENST00000457792 225 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 AC008571.1-201ENST00000467232 300 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 RN7SL459P-201ENST00000481078 302 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 RN7SL814P-201ENST00000487715 300 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 AC008897.1-201ENST00000494006 347 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 RNU6-488P-201ENST00000515918 99 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 MIR4703-201ENST00000577728 79 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 AC011487.3-201ENST00000593607 453 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 AC068790.3-201ENST00000602988 553 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 AC098479.1-201ENST00000609225 154 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 uc_338.12-201ENST00000616344 181 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 BX005214.3-202ENST00000619809 325 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 CDRT1-208ENST00000630868 794 ntBASIC5.36□□□□□ -1.55
RNF43Q68DV7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF43Q68DV7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF43Q68DV7 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RNF43Q68DV7 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.36□□□□□ -1.55
RNF43Q68DV7 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RNF43Q68DV7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF43Q68DV7 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF43Q68DV7 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF43Q68DV7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF43Q68DV7 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF43Q68DV7 AL442639.1-201ENST00000625030 1899 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF43Q68DV7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF43Q68DV7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.35□□□□□ -1.55
RNF43Q68DV7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RNF43Q68DV7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RNF43Q68DV7 DHX40P1-201ENST00000588725 1412 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 SNORA62-201ENST00000365493 153 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 RNY3P13-201ENST00000365542 102 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 AL360182.1-201ENST00000397433 468 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 AL078599.1-201ENST00000402075 293 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 RNU6-101P-201ENST00000410323 104 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 AC068533.1-201ENST00000418542 415 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 ATG3P1-201ENST00000419507 911 ntBASIC5.35□□□□□ -1.55
RNF43Q68DV7 EIF4EP1-201ENST00000422311 642 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms