Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 FCF1P1-201ENST00000432690 571 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 PTMAP6-201ENST00000439110 327 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 MTCO3P45-201ENST00000443036 613 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC091685.2-201ENST00000454924 864 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 RPL23AP31-201ENST00000456160 467 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 RPS3AP41-201ENST00000462701 778 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC004924.1-201ENST00000480160 781 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC008638.1-201ENST00000506035 866 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 RNU2-10P-201ENST00000516375 211 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC022616.3-201ENST00000523940 148 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC008489.1-201ENST00000524271 483 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC016957.1-201ENST00000534895 309 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC123904.3-201ENST00000547218 814 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC044860.2-201ENST00000561005 179 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC103710.2-201ENST00000609912 942 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC024941.1-201ENST00000612250 334 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AL592295.2-201ENST00000612578 206 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC092326.2-201ENST00000624772 1561 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 AC139769.1-204ENST00000472297 1931 ntBASIC4.21□□□□□ -1.74
RNF220Q5VTB9 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
RNF220Q5VTB9 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC131971.1-201ENST00000332881 1482 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 XIAPP3-201ENST00000312918 795 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 OR5J1P-201ENST00000313544 939 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 RNU6-600P-201ENST00000362524 99 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 RNA5SP87-201ENST00000384155 118 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 VDAC1P3-201ENST00000434069 851 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 RPL26P6-201ENST00000440913 438 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC132479.1-201ENST00000449160 144 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC008481.1-201ENST00000463278 396 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 RPL32P9-201ENST00000487963 407 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 RPL9P6-201ENST00000492764 598 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 NIPA2P2-201ENST00000496376 1083 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 RNU6-506P-201ENST00000516553 94 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 SNORA31.22-201ENST00000517204 135 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC100870.1-201ENST00000522035 505 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 OR5D17P-201ENST00000531492 978 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC128657.1-201ENST00000549459 145 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 MIR4293-201ENST00000584305 78 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AF038458.1-201ENST00000588406 262 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC006116.10-201ENST00000591836 581 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AP001330.4-201ENST00000604350 154 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AL158209.2-201ENST00000619266 216 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 LRRC77P-213ENST00000637727 880 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.2□□□□□ -1.74
RNF220Q5VTB9 AC010300.1-201ENST00000600671 5134 ntBASIC4.2□□□□□ -1.74
RNF220Q5VTB9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 LINC00622-201ENST00000562811 1570 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AC108467.2-201ENST00000617640 1597 ntBASIC4.19□□□□□ -1.74
RNF220Q5VTB9 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RNF220Q5VTB9 AL590240.1-201ENST00000334118 313 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms