Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 AC019193.2-201ENST00000610012 634 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 AC092794.2-201ENST00000620933 563 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.07□□□□□ -1.6
SSRP1Q08945 MIR6715B-201ENST00000637172 77 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
SSRP1Q08945 AC090229.1-201ENST00000590983 1609 ntBASIC5.07□□□□□ -1.6
SSRP1Q08945 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.07□□□□□ -1.6
SSRP1Q08945 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.07□□□□□ -1.6
SSRP1Q08945 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSRP1Q08945 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSRP1Q08945 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSRP1Q08945 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSRP1Q08945 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSRP1Q08945 U3.11-201ENST00000364476 212 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.06□□□□□ -1.6
SSRP1Q08945 RNU6-837P-201ENST00000391056 108 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSRP1Q08945 AC097374.1-203ENST00000400783 485 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 RPS4XP9-201ENST00000405151 780 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 RNU6-516P-201ENST00000411381 104 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 RPL26P29-201ENST00000415623 438 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 MRPL50P2-201ENST00000416821 482 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 ZNF90P2-204ENST00000419323 1075 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC5.06□□□□□ -1.6
SSRP1Q08945 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.06□□□□□ -1.6
SSRP1Q08945 AC011998.1-201ENST00000433403 117 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 AL132765.1-201ENST00000434165 553 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC5.06□□□□□ -1.6
SSRP1Q08945 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.06□□□□□ -1.6
SSRP1Q08945 snoU13.1-201ENST00000459157 104 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 RN7SL738P-201ENST00000470264 297 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 AC083798.1-201ENST00000472671 131 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.06□□□□□ -1.6
SSRP1Q08945 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.06□□□□□ -1.6
SSRP1Q08945 AC015795.1-201ENST00000513669 327 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 AC008694.2-201ENST00000517591 306 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.06□□□□□ -1.6
SSRP1Q08945 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC5.06□□□□□ -1.6
SSRP1Q08945 OR4R1P-201ENST00000529879 463 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 AL352979.3-201ENST00000553515 247 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 AL109766.1-201ENST00000555080 552 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 HMGB1P6-201ENST00000569046 646 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.06□□□□□ -1.6
SSRP1Q08945 NRBF2P5-201ENST00000603087 788 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 AC103710.2-201ENST00000609912 942 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 TUG1_1.1-201ENST00000610654 145 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.06□□□□□ -1.6
SSRP1Q08945 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.06□□□□□ -1.6
SSRP1Q08945 AL021997.2-201ENST00000615674 271 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 uc_338.13-201ENST00000618243 179 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SSRP1Q08945 FER-210ENST00000628534 558 ntTSL 5 BASIC5.06□□□□□ -1.6
SSRP1Q08945 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSRP1Q08945 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.06□□□□□ -1.6
SSRP1Q08945 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.06□□□□□ -1.6
SSRP1Q08945 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSRP1Q08945 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSRP1Q08945 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSRP1Q08945 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSRP1Q08945 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSRP1Q08945 RNU5E-8P-201ENST00000363502 116 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 RNA5SP175-201ENST00000364275 119 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 RNU6-432P-201ENST00000384196 109 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 AC068050.1-201ENST00000394891 380 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 SNORA11F-201ENST00000408237 128 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 RNU2-9P-201ENST00000410194 145 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 AC009237.5-201ENST00000414271 501 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 AC138393.2-201ENST00000414742 246 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.05□□□□□ -1.6
SSRP1Q08945 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.05□□□□□ -1.6
SSRP1Q08945 AC016712.1-201ENST00000431088 378 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSRP1Q08945 RPS15AP9-201ENST00000439856 381 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 PHBP16-201ENST00000446318 950 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.05□□□□□ -1.6
SSRP1Q08945 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.05□□□□□ -1.6
SSRP1Q08945 RPS29P25-201ENST00000481709 171 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSRP1Q08945 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSRP1Q08945 AC103783.1-201ENST00000520506 373 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.05□□□□□ -1.6
SSRP1Q08945 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC5.05□□□□□ -1.6
SSRP1Q08945 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.05□□□□□ -1.6
SSRP1Q08945 AC068831.4-201ENST00000556118 109 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 RPL21P12-201ENST00000559810 515 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.05□□□□□ -1.6
SSRP1Q08945 AC012417.1-201ENST00000582307 1039 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 GLUD1P4-201ENST00000590914 418 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 IGHV3-29-201ENST00000604817 344 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 AC113403.1-201ENST00000604910 193 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.05□□□□□ -1.6
SSRP1Q08945 AC025253.1-201ENST00000613623 543 ntBASIC5.05□□□□□ -1.6
SSRP1Q08945 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.05□□□□□ -1.6
SSRP1Q08945 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSRP1Q08945 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSRP1Q08945 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.05□□□□□ -1.6
SSRP1Q08945 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSRP1Q08945 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.05□□□□□ -1.6
SSRP1Q08945 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
SSRP1Q08945 AC244517.1-201ENST00000606030 2086 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms