Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC112673.1-201ENST00000513168 575 ntBASIC1.97□□□□□ -2.09
CCL20P78556 RNU6-27P-201ENST00000516146 107 ntBASIC1.97□□□□□ -2.09
CCL20P78556 RNU6-1095P-201ENST00000516148 108 ntBASIC1.97□□□□□ -2.09
CCL20P78556 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.97□□□□□ -2.09
CCL20P78556 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.97□□□□□ -2.09
CCL20P78556 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.97□□□□□ -2.09
CCL20P78556 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.97□□□□□ -2.09
CCL20P78556 SNORD39.3-201ENST00000584451 71 ntBASIC1.97□□□□□ -2.09
CCL20P78556 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.97□□□□□ -2.09
CCL20P78556 AC079089.3-201ENST00000603094 673 ntBASIC1.97□□□□□ -2.09
CCL20P78556 AC245389.1-201ENST00000605141 529 ntBASIC1.97□□□□□ -2.09
CCL20P78556 AP004247.3-201ENST00000608682 624 ntBASIC1.97□□□□□ -2.09
CCL20P78556 AC096586.1-201ENST00000610267 561 ntBASIC1.97□□□□□ -2.09
CCL20P78556 AC024941.1-201ENST00000612250 334 ntBASIC1.97□□□□□ -2.09
CCL20P78556 AC039056.2-201ENST00000622261 511 ntBASIC1.97□□□□□ -2.09
CCL20P78556 AC027309.3-201ENST00000623419 351 ntBASIC1.97□□□□□ -2.09
CCL20P78556 AP006248.3-201ENST00000623580 594 ntBASIC1.97□□□□□ -2.09
CCL20P78556 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCL20P78556 AC087359.1-201ENST00000508335 1740 ntBASIC1.97□□□□□ -2.09
CCL20P78556 TANK-205ENST00000405852 2155 ntTSL 5 BASIC1.96□□□□□ -2.1
CCL20P78556 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCL20P78556 ZNF519P1-201ENST00000449011 1626 ntBASIC1.96□□□□□ -2.1
CCL20P78556 ANAPC10P1-201ENST00000395991 556 ntBASIC1.96□□□□□ -2.1
CCL20P78556 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
CCL20P78556 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCL20P78556 AL009174.1-201ENST00000426577 416 ntBASIC1.96□□□□□ -2.1
CCL20P78556 AL159987.2-201ENST00000432754 307 ntBASIC1.96□□□□□ -2.1
CCL20P78556 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL20P78556 AC009296.1-201ENST00000443146 155 ntBASIC1.96□□□□□ -2.1
CCL20P78556 AL513328.1-201ENST00000446460 224 ntBASIC1.96□□□□□ -2.1
CCL20P78556 AL031659.1-201ENST00000447075 539 ntBASIC1.96□□□□□ -2.1
CCL20P78556 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.96□□□□□ -2.1
CCL20P78556 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL20P78556 PNPLA4P1-201ENST00000458328 305 ntBASIC1.96□□□□□ -2.1
CCL20P78556 snoU109.4-201ENST00000458953 143 ntBASIC1.96□□□□□ -2.1
CCL20P78556 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.96□□□□□ -2.1
CCL20P78556 RN7SL504P-201ENST00000494496 287 ntBASIC1.96□□□□□ -2.1
CCL20P78556 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCL20P78556 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.96□□□□□ -2.1
CCL20P78556 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL20P78556 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL20P78556 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC1.96□□□□□ -2.1
CCL20P78556 MIR3160-1-201ENST00000577972 85 ntBASIC1.96□□□□□ -2.1
CCL20P78556 AC011260.1-201ENST00000578420 472 ntBASIC1.96□□□□□ -2.1
CCL20P78556 AC090616.3-201ENST00000582184 217 ntBASIC1.96□□□□□ -2.1
CCL20P78556 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.96□□□□□ -2.1
CCL20P78556 AL022099.1-201ENST00000604551 712 ntBASIC1.96□□□□□ -2.1
CCL20P78556 AC010738.1-201ENST00000604970 987 ntBASIC1.96□□□□□ -2.1
CCL20P78556 AC012443.1-201ENST00000605605 231 ntBASIC1.96□□□□□ -2.1
CCL20P78556 AL161629.2-201ENST00000615347 275 ntBASIC1.96□□□□□ -2.1
CCL20P78556 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.96□□□□□ -2.1
CCL20P78556 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CCL20P78556 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCL20P78556 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCL20P78556 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC1.95□□□□□ -2.1
CCL20P78556 RNA5SP515-201ENST00000364570 118 ntBASIC1.95□□□□□ -2.1
CCL20P78556 SET-203ENST00000372688 801 ntTSL 2 BASIC1.95□□□□□ -2.1
CCL20P78556 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCL20P78556 SNORA18.3-201ENST00000384122 132 ntBASIC1.95□□□□□ -2.1
CCL20P78556 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.95□□□□□ -2.1
CCL20P78556 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.95□□□□□ -2.1
CCL20P78556 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.95□□□□□ -2.1
CCL20P78556 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.95□□□□□ -2.1
CCL20P78556 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC1.95□□□□□ -2.1
CCL20P78556 AC092427.1-202ENST00000430569 476 ntBASIC1.95□□□□□ -2.1
CCL20P78556 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.95□□□□□ -2.1
CCL20P78556 AC092573.2-201ENST00000434546 243 ntBASIC1.95□□□□□ -2.1
CCL20P78556 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.95□□□□□ -2.1
CCL20P78556 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.95□□□□□ -2.1
CCL20P78556 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.95□□□□□ -2.1
CCL20P78556 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CCL20P78556 GTF2IP9-201ENST00000502460 301 ntBASIC1.95□□□□□ -2.1
CCL20P78556 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.95□□□□□ -2.1
CCL20P78556 AC093767.1-201ENST00000504523 156 ntBASIC1.95□□□□□ -2.1
CCL20P78556 SNORA31.21-201ENST00000517180 77 ntBASIC1.95□□□□□ -2.1
CCL20P78556 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.95□□□□□ -2.1
CCL20P78556 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.95□□□□□ -2.1
CCL20P78556 ZNF705CP-201ENST00000530515 889 ntBASIC1.95□□□□□ -2.1
CCL20P78556 OR4R2P-201ENST00000530815 597 ntBASIC1.95□□□□□ -2.1
CCL20P78556 AP002404.1-201ENST00000532005 451 ntBASIC1.95□□□□□ -2.1
CCL20P78556 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCL20P78556 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCL20P78556 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
CCL20P78556 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.95□□□□□ -2.1
CCL20P78556 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC1.95□□□□□ -2.1
CCL20P78556 CYCSP39-201ENST00000565821 309 ntBASIC1.95□□□□□ -2.1
CCL20P78556 AC095057.3-201ENST00000567102 1157 ntBASIC1.95□□□□□ -2.1
CCL20P78556 AC103810.1-201ENST00000579873 453 ntBASIC1.95□□□□□ -2.1
CCL20P78556 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.95□□□□□ -2.1
CCL20P78556 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.95□□□□□ -2.1
CCL20P78556 AL035413.2-201ENST00000604801 525 ntBASIC1.95□□□□□ -2.1
CCL20P78556 AL136363.1-201ENST00000605349 337 ntBASIC1.95□□□□□ -2.1
CCL20P78556 AP002826.1-201ENST00000608835 315 ntBASIC1.95□□□□□ -2.1
CCL20P78556 AC068724.3-201ENST00000625906 87 ntBASIC1.95□□□□□ -2.1
CCL20P78556 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCL20P78556 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCL20P78556 AC007336.1-201ENST00000576365 3828 ntBASIC1.94□□□□□ -2.1
CCL20P78556 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCL20P78556 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC1.94□□□□□ -2.1
CCL20P78556 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms