Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL139395.1-201ENST00000603662 160 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AC114781.5-201ENST00000615297 108 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AL356585.4-201ENST00000623078 1229 ntBASIC3.94□□□□□ -1.78
RAE1P78406 AP005264.7-201ENST00000625003 745 ntBASIC3.94□□□□□ -1.78
RAE1P78406 MIR3688-2-201ENST00000636963 87 ntBASIC3.94□□□□□ -1.78
RAE1P78406 MIR6715B-201ENST00000637172 77 ntBASIC3.94□□□□□ -1.78
RAE1P78406 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.94□□□□□ -1.78
RAE1P78406 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
RAE1P78406 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RAE1P78406 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.94□□□□□ -1.78
RAE1P78406 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RAE1P78406 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
RAE1P78406 AC004520.1-201ENST00000608362 1413 ntBASIC3.94□□□□□ -1.78
RAE1P78406 GHR-213ENST00000622294 4312 ntTSL 5 BASIC3.94□□□□□ -1.78
RAE1P78406 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RAE1P78406 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RAE1P78406 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RAE1P78406 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RAE1P78406 Y_RNA.256-201ENST00000364594 104 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.93□□□□□ -1.78
RAE1P78406 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.93□□□□□ -1.78
RAE1P78406 SNORA20.2-201ENST00000383922 131 ntBASIC3.93□□□□□ -1.78
RAE1P78406 MIR1277-201ENST00000408536 78 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.93□□□□□ -1.78
RAE1P78406 AC245028.1-201ENST00000423259 256 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RAE1P78406 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.93□□□□□ -1.78
RAE1P78406 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.93□□□□□ -1.78
RAE1P78406 COX6B1P7-201ENST00000430845 235 ntBASIC3.93□□□□□ -1.78
RAE1P78406 BTF3P10-201ENST00000433415 495 ntBASIC3.93□□□□□ -1.78
RAE1P78406 TIMM9P1-201ENST00000436122 256 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AC122718.1-201ENST00000439448 744 ntBASIC3.93□□□□□ -1.78
RAE1P78406 MTATP6P23-201ENST00000440153 476 ntBASIC3.93□□□□□ -1.78
RAE1P78406 MTND4P18-201ENST00000447010 465 ntBASIC3.93□□□□□ -1.78
RAE1P78406 TPT1P14-201ENST00000448018 505 ntBASIC3.93□□□□□ -1.78
RAE1P78406 MTND2P24-201ENST00000453434 806 ntBASIC3.93□□□□□ -1.78
RAE1P78406 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.93□□□□□ -1.78
RAE1P78406 UBDP1-202ENST00000457888 382 ntBASIC3.93□□□□□ -1.78
RAE1P78406 FAM133DP-201ENST00000464802 691 ntBASIC3.93□□□□□ -1.78
RAE1P78406 RN7SL303P-201ENST00000469773 251 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.93□□□□□ -1.78
RAE1P78406 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.93□□□□□ -1.78
RAE1P78406 AC009646.1-201ENST00000510455 318 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.93□□□□□ -1.78
RAE1P78406 RNU7-143P-201ENST00000516781 65 ntBASIC3.93□□□□□ -1.78
RAE1P78406 IGKV2-38-201ENST00000517443 247 ntBASIC3.93□□□□□ -1.78
RAE1P78406 OR4R3P-201ENST00000525084 838 ntBASIC3.93□□□□□ -1.78
RAE1P78406 OR5AQ1P-201ENST00000527596 927 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AP003034.1-201ENST00000534621 422 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.93□□□□□ -1.78
RAE1P78406 CR383656.7-201ENST00000548164 174 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.93□□□□□ -1.78
RAE1P78406 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
RAE1P78406 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.93□□□□□ -1.78
RAE1P78406 RPL23AP87-202ENST00000573039 466 ntBASIC3.93□□□□□ -1.78
RAE1P78406 MIR4277-201ENST00000578298 84 ntBASIC3.93□□□□□ -1.78
RAE1P78406 MIR3167-201ENST00000579623 85 ntBASIC3.93□□□□□ -1.78
RAE1P78406 KC877982.1-201ENST00000602313 470 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AL391646.1-201ENST00000603860 190 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AC112230.1-201ENST00000604342 547 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AC004908.2-201ENST00000609090 574 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AC007014.2-201ENST00000615581 479 ntBASIC3.93□□□□□ -1.78
RAE1P78406 MIR7151-201ENST00000617477 60 ntBASIC3.93□□□□□ -1.78
RAE1P78406 AC112204.3-201ENST00000623822 332 ntBASIC3.93□□□□□ -1.78
RAE1P78406 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RAE1P78406 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.93□□□□□ -1.78
RAE1P78406 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RAE1P78406 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RAE1P78406 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RAE1P78406 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RAE1P78406 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RAE1P78406 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
RAE1P78406 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.93□□□□□ -1.78
RAE1P78406 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
RAE1P78406 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RAE1P78406 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RAE1P78406 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RAE1P78406 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.92□□□□□ -1.78
RAE1P78406 AC116667.1-201ENST00000604855 2072 ntBASIC3.92□□□□□ -1.78
RAE1P78406 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.92□□□□□ -1.78
RAE1P78406 RNU6-1078P-201ENST00000364522 103 ntBASIC3.92□□□□□ -1.78
RAE1P78406 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.92□□□□□ -1.78
RAE1P78406 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
RAE1P78406 MIR937-201ENST00000401271 86 ntBASIC3.92□□□□□ -1.78
RAE1P78406 RNA5SP104-201ENST00000410989 118 ntBASIC3.92□□□□□ -1.78
RAE1P78406 AC092447.6-201ENST00000414578 210 ntBASIC3.92□□□□□ -1.78
RAE1P78406 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.92□□□□□ -1.78
RAE1P78406 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.92□□□□□ -1.78
RAE1P78406 RPS15AP12-201ENST00000419498 388 ntBASIC3.92□□□□□ -1.78
RAE1P78406 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.92□□□□□ -1.78
RAE1P78406 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
RAE1P78406 AL358472.1-201ENST00000431295 329 ntBASIC3.92□□□□□ -1.78
RAE1P78406 RPL23AP46-201ENST00000438548 490 ntBASIC3.92□□□□□ -1.78
RAE1P78406 RPL21P89-201ENST00000444021 467 ntBASIC3.92□□□□□ -1.78
RAE1P78406 AC108059.3-201ENST00000456388 214 ntBASIC3.92□□□□□ -1.78
RAE1P78406 RPL36AP13-201ENST00000457490 317 ntBASIC3.92□□□□□ -1.78
RAE1P78406 RN7SL481P-201ENST00000477764 299 ntBASIC3.92□□□□□ -1.78
RAE1P78406 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.92□□□□□ -1.78
RAE1P78406 AC025445.1-201ENST00000502728 300 ntBASIC3.92□□□□□ -1.78
RAE1P78406 AC108475.1-201ENST00000507880 950 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms