Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC135628.1-201ENST00000568867 534 ntBASIC1.17□□□□□ -2.22
RPL39P62891 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.17□□□□□ -2.22
RPL39P62891 AC124283.4-201ENST00000581815 456 ntBASIC1.17□□□□□ -2.22
RPL39P62891 AC008749.1-201ENST00000597650 306 ntBASIC1.17□□□□□ -2.22
RPL39P62891 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.17□□□□□ -2.22
RPL39P62891 AC020658.4-201ENST00000613987 684 ntBASIC1.17□□□□□ -2.22
RPL39P62891 AC024023.1-201ENST00000624530 922 ntBASIC1.17□□□□□ -2.22
RPL39P62891 MFSD8-245ENST00000641743 948 ntBASIC1.17□□□□□ -2.22
RPL39P62891 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC1.17□□□□□ -2.22
RPL39P62891 AL390862.1-201ENST00000635467 1469 ntBASIC1.17□□□□□ -2.22
RPL39P62891 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RPL39P62891 AC011460.1-201ENST00000636268 1834 ntBASIC1.17□□□□□ -2.22
RPL39P62891 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RPL39P62891 AC026241.1-201ENST00000517873 2142 ntBASIC1.16□□□□□ -2.22
RPL39P62891 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.16□□□□□ -2.22
RPL39P62891 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RPL39P62891 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RPL39P62891 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RPL39P62891 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RPL39P62891 RNU6-461P-201ENST00000364195 107 ntBASIC1.16□□□□□ -2.22
RPL39P62891 RNA5SP88-201ENST00000365560 109 ntBASIC1.16□□□□□ -2.22
RPL39P62891 OR13C3-201ENST00000374781 1108 ntBASIC1.16□□□□□ -2.22
RPL39P62891 SNORA46.1-201ENST00000391069 153 ntBASIC1.16□□□□□ -2.22
RPL39P62891 AL122016.1-201ENST00000403365 367 ntBASIC1.16□□□□□ -2.22
RPL39P62891 RPL7P27-201ENST00000403775 720 ntBASIC1.16□□□□□ -2.22
RPL39P62891 RNA5SP425-201ENST00000410336 112 ntBASIC1.16□□□□□ -2.22
RPL39P62891 POLHP1-201ENST00000411806 470 ntBASIC1.16□□□□□ -2.22
RPL39P62891 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.16□□□□□ -2.22
RPL39P62891 AL139415.2-201ENST00000431968 163 ntBASIC1.16□□□□□ -2.22
RPL39P62891 TRAPPC2P9-201ENST00000434556 343 ntBASIC1.16□□□□□ -2.22
RPL39P62891 FAM103A2P-201ENST00000444122 354 ntBASIC1.16□□□□□ -2.22
RPL39P62891 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.16□□□□□ -2.22
RPL39P62891 RPL7P12-201ENST00000446719 750 ntBASIC1.16□□□□□ -2.22
RPL39P62891 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
RPL39P62891 OR7L1P-201ENST00000456181 380 ntBASIC1.16□□□□□ -2.22
RPL39P62891 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.16□□□□□ -2.22
RPL39P62891 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.16□□□□□ -2.22
RPL39P62891 AC110588.1-201ENST00000559699 137 ntBASIC1.16□□□□□ -2.22
RPL39P62891 AC009127.3-201ENST00000570531 403 ntBASIC1.16□□□□□ -2.22
RPL39P62891 OR4K8P-201ENST00000578842 1048 ntBASIC1.16□□□□□ -2.22
RPL39P62891 BNIP3P33-201ENST00000598912 569 ntBASIC1.16□□□□□ -2.22
RPL39P62891 AC123786.2-201ENST00000603459 275 ntBASIC1.16□□□□□ -2.22
RPL39P62891 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
RPL39P62891 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
RPL39P62891 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
RPL39P62891 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
RPL39P62891 AC104454.1-201ENST00000421341 1401 ntBASIC1.15□□□□□ -2.22
RPL39P62891 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RPL39P62891 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
RPL39P62891 MIR483-201ENST00000385070 76 ntBASIC1.15□□□□□ -2.23
RPL39P62891 MIR524-201ENST00000385242 87 ntBASIC1.15□□□□□ -2.23
RPL39P62891 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
RPL39P62891 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.15□□□□□ -2.23
RPL39P62891 RNA5SP38-201ENST00000410750 119 ntBASIC1.15□□□□□ -2.23
RPL39P62891 OR4K6P-201ENST00000416478 897 ntBASIC1.15□□□□□ -2.23
RPL39P62891 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.15□□□□□ -2.23
RPL39P62891 snoU13.22-201ENST00000459428 104 ntBASIC1.15□□□□□ -2.23
RPL39P62891 AC104472.2-201ENST00000469035 601 ntBASIC1.15□□□□□ -2.23
RPL39P62891 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.15□□□□□ -2.23
RPL39P62891 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
RPL39P62891 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.15□□□□□ -2.23
RPL39P62891 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.15□□□□□ -2.23
RPL39P62891 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.15□□□□□ -2.23
RPL39P62891 AF279873.1-201ENST00000523393 313 ntBASIC1.15□□□□□ -2.23
RPL39P62891 AC084851.1-201ENST00000529105 249 ntBASIC1.15□□□□□ -2.23
RPL39P62891 SETP7-201ENST00000552169 453 ntBASIC1.15□□□□□ -2.23
RPL39P62891 DEFB122-202ENST00000569013 197 ntBASIC1.15□□□□□ -2.23
RPL39P62891 AP001180.3-201ENST00000582221 145 ntBASIC1.15□□□□□ -2.23
RPL39P62891 IGHVIII-44-202ENST00000636235 289 ntBASIC1.15□□□□□ -2.23
RPL39P62891 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
RPL39P62891 ZNF658B-202ENST00000615961 3375 ntBASIC1.15□□□□□ -2.23
RPL39P62891 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.15□□□□□ -2.23
RPL39P62891 MTND5P29-201ENST00000458676 1807 ntBASIC1.15□□□□□ -2.23
RPL39P62891 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.15□□□□□ -2.23
RPL39P62891 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
RPL39P62891 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
RPL39P62891 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.14□□□□□ -2.23
RPL39P62891 RNU6-761P-201ENST00000384148 107 ntBASIC1.14□□□□□ -2.23
RPL39P62891 AL445529.1-201ENST00000398713 389 ntBASIC1.14□□□□□ -2.23
RPL39P62891 RNU4-72P-201ENST00000410754 173 ntBASIC1.14□□□□□ -2.23
RPL39P62891 RN7SKP101-201ENST00000411376 320 ntBASIC1.14□□□□□ -2.23
RPL39P62891 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.14□□□□□ -2.23
RPL39P62891 AL512661.1-201ENST00000434586 1253 ntBASIC1.14□□□□□ -2.23
RPL39P62891 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.14□□□□□ -2.23
RPL39P62891 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.14□□□□□ -2.23
RPL39P62891 RPL7P52-201ENST00000449200 742 ntBASIC1.14□□□□□ -2.23
RPL39P62891 EEF1B2P7-201ENST00000451177 676 ntBASIC1.14□□□□□ -2.23
RPL39P62891 NECAP1P2-201ENST00000455668 727 ntBASIC1.14□□□□□ -2.23
RPL39P62891 AP001486.1-201ENST00000463339 476 ntBASIC1.14□□□□□ -2.23
RPL39P62891 HMGN1P8-201ENST00000463578 288 ntBASIC1.14□□□□□ -2.23
RPL39P62891 AC017007.3-201ENST00000479865 435 ntBASIC1.14□□□□□ -2.23
RPL39P62891 AC008427.1-201ENST00000503102 655 ntBASIC1.14□□□□□ -2.23
RPL39P62891 ANXA2P1-201ENST00000505539 926 ntBASIC1.14□□□□□ -2.23
RPL39P62891 AC087373.1-201ENST00000524920 491 ntBASIC1.14□□□□□ -2.23
RPL39P62891 AP003385.6-201ENST00000531603 374 ntBASIC1.14□□□□□ -2.23
RPL39P62891 AL161713.1-201ENST00000555538 145 ntBASIC1.14□□□□□ -2.23
RPL39P62891 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
RPL39P62891 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.14□□□□□ -2.23
RPL39P62891 AC087241.4-201ENST00000612441 480 ntBASIC1.14□□□□□ -2.23
RPL39P62891 AC245884.12-201ENST00000615364 59 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms