Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.12□□□□□ -1.91
RPS4XP62701 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.12□□□□□ -1.91
RPS4XP62701 RNU6-150P-201ENST00000516237 95 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 AC105185.1-201ENST00000518705 535 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 NDUFB9P3-201ENST00000521269 501 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RPS4XP62701 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RPS4XP62701 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.12□□□□□ -1.91
RPS4XP62701 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.12□□□□□ -1.91
RPS4XP62701 SYF2P1-201ENST00000550658 413 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.12□□□□□ -1.91
RPS4XP62701 DUXAP1-201ENST00000556632 463 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.12□□□□□ -1.91
RPS4XP62701 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.12□□□□□ -1.91
RPS4XP62701 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.12□□□□□ -1.91
RPS4XP62701 AC067852.3-201ENST00000589177 561 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 AL031985.2-201ENST00000600955 480 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 DUXAP11-201ENST00000603858 526 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 AL031176.1-201ENST00000604554 466 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.12□□□□□ -1.91
RPS4XP62701 VIS1.1-201ENST00000610517 203 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 U4.6-201ENST00000621618 127 ntBASIC3.12□□□□□ -1.91
RPS4XP62701 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.12□□□□□ -1.91
RPS4XP62701 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.12□□□□□ -1.91
RPS4XP62701 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RPS4XP62701 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RPS4XP62701 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
RPS4XP62701 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.12□□□□□ -1.91
RPS4XP62701 PWAR6-201ENST00000552334 4618 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.11□□□□□ -1.91
RPS4XP62701 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.11□□□□□ -1.91
RPS4XP62701 RNU6-50P-201ENST00000362356 103 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 RNU6-343P-201ENST00000364709 104 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 RNA5SP267-201ENST00000364893 126 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPS4XP62701 DEFB109C-201ENST00000382575 264 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 DEFB109B-201ENST00000382656 264 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 RNA5SP129-201ENST00000410276 118 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.11□□□□□ -1.91
RPS4XP62701 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.11□□□□□ -1.91
RPS4XP62701 MTCO2P21-201ENST00000419780 677 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 AL159169.1-201ENST00000421119 127 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 BEND7P1-201ENST00000422058 457 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.11□□□□□ -1.91
RPS4XP62701 AC091390.3-201ENST00000426478 338 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 MTND5P14-201ENST00000441481 1267 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.11□□□□□ -1.91
RPS4XP62701 BX322784.1-201ENST00000455793 1077 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 U3.44-201ENST00000458938 192 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 RPL21P10-201ENST00000463521 490 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.11□□□□□ -1.91
RPS4XP62701 FAM172BP-201ENST00000487497 1089 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 RPL7P47-201ENST00000497299 556 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 MLLT10P2-201ENST00000506434 249 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.11□□□□□ -1.91
RPS4XP62701 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.11□□□□□ -1.91
RPS4XP62701 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.11□□□□□ -1.91
RPS4XP62701 SNORA31.8-201ENST00000516327 108 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 MIR2276-201ENST00000516886 89 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 COX6CP8-201ENST00000522620 226 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.11□□□□□ -1.91
RPS4XP62701 SNRPGP16-201ENST00000533275 226 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.11□□□□□ -1.91
RPS4XP62701 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.11□□□□□ -1.91
RPS4XP62701 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPS4XP62701 AC011611.1-201ENST00000552179 197 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.11□□□□□ -1.91
RPS4XP62701 MIR3200-201ENST00000580767 85 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 AC025588.2-201ENST00000604851 466 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.11□□□□□ -1.91
RPS4XP62701 AC103710.3-201ENST00000608157 948 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.11□□□□□ -1.91
RPS4XP62701 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.11□□□□□ -1.91
RPS4XP62701 AL442067.2-201ENST00000614033 363 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 AL355365.1-201ENST00000616480 294 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 CRYM-AS1-204ENST00000637983 556 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPS4XP62701 AC011477.1-204ENST00000623416 1325 ntBASIC3.11□□□□□ -1.91
RPS4XP62701 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPS4XP62701 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPS4XP62701 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.11□□□□□ -1.91
RPS4XP62701 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.11□□□□□ -1.91
RPS4XP62701 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPS4XP62701 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPS4XP62701 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPS4XP62701 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
RPS4XP62701 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.1□□□□□ -1.91
RPS4XP62701 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPS4XP62701 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPS4XP62701 SGO1P2-201ENST00000429458 1589 ntBASIC3.1□□□□□ -1.91
RPS4XP62701 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RPS4XP62701 RNU1-75P-201ENST00000347264 129 ntBASIC3.1□□□□□ -1.91
RPS4XP62701 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
RPS4XP62701 SNORD113-6-201ENST00000363345 75 ntBASIC3.1□□□□□ -1.91
RPS4XP62701 SNORD6-201ENST00000365444 73 ntBASIC3.1□□□□□ -1.91
RPS4XP62701 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.1□□□□□ -1.91
RPS4XP62701 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPS4XP62701 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.1□□□□□ -1.91
RPS4XP62701 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms