Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RNU4-78P-201ENST00000410940 126 ntBASIC2.18□□□□□ -2.06
SRP9P49458 AL109933.2-201ENST00000452651 260 ntBASIC2.18□□□□□ -2.06
SRP9P49458 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.18□□□□□ -2.06
SRP9P49458 AC098799.1-201ENST00000504752 800 ntBASIC2.18□□□□□ -2.06
SRP9P49458 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.18□□□□□ -2.06
SRP9P49458 OR5BM1P-201ENST00000512021 366 ntBASIC2.18□□□□□ -2.06
SRP9P49458 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.18□□□□□ -2.06
SRP9P49458 CU459211.1-201ENST00000635667 749 ntBASIC2.18□□□□□ -2.06
SRP9P49458 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SRP9P49458 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.18□□□□□ -2.06
SRP9P49458 AC104446.1-201ENST00000613728 1321 ntBASIC2.17□□□□□ -2.06
SRP9P49458 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SRP9P49458 RPL21P132-201ENST00000331267 462 ntBASIC2.17□□□□□ -2.06
SRP9P49458 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.17□□□□□ -2.06
SRP9P49458 RNU6-452P-201ENST00000384406 107 ntBASIC2.17□□□□□ -2.06
SRP9P49458 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.17□□□□□ -2.06
SRP9P49458 DHFRP5-201ENST00000406944 564 ntBASIC2.17□□□□□ -2.06
SRP9P49458 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.17□□□□□ -2.06
SRP9P49458 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.17□□□□□ -2.06
SRP9P49458 RPL7P30-201ENST00000420888 709 ntBASIC2.17□□□□□ -2.06
SRP9P49458 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SRP9P49458 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.17□□□□□ -2.06
SRP9P49458 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.17□□□□□ -2.06
SRP9P49458 AC009296.1-201ENST00000443146 155 ntBASIC2.17□□□□□ -2.06
SRP9P49458 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.17□□□□□ -2.06
SRP9P49458 AC104389.3-201ENST00000445629 235 ntBASIC2.17□□□□□ -2.06
SRP9P49458 C1DP3-201ENST00000455013 423 ntBASIC2.17□□□□□ -2.06
SRP9P49458 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.17□□□□□ -2.06
SRP9P49458 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.17□□□□□ -2.06
SRP9P49458 AC107222.1-201ENST00000510899 637 ntBASIC2.17□□□□□ -2.06
SRP9P49458 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.17□□□□□ -2.06
SRP9P49458 OR5BN1P-201ENST00000532955 829 ntBASIC2.17□□□□□ -2.06
SRP9P49458 AC243972.3-201ENST00000539655 198 ntBASIC2.17□□□□□ -2.06
SRP9P49458 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.17□□□□□ -2.06
SRP9P49458 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.17□□□□□ -2.06
SRP9P49458 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.17□□□□□ -2.06
SRP9P49458 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
SRP9P49458 MIMT1-201ENST00000597105 1050 ntBASIC2.17□□□□□ -2.06
SRP9P49458 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SRP9P49458 AL355810.1-201ENST00000614629 552 ntBASIC2.17□□□□□ -2.06
SRP9P49458 AC079597.1-201ENST00000624306 508 ntBASIC2.17□□□□□ -2.06
SRP9P49458 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.17□□□□□ -2.06
SRP9P49458 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SRP9P49458 NSRP1P1-201ENST00000444067 1693 ntBASIC2.17□□□□□ -2.06
SRP9P49458 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SRP9P49458 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
SRP9P49458 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
SRP9P49458 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
SRP9P49458 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SRP9P49458 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP9P49458 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP9P49458 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
SRP9P49458 RNU1-52P-201ENST00000384190 164 ntBASIC2.16□□□□□ -2.06
SRP9P49458 MIR27B-201ENST00000385129 97 ntBASIC2.16□□□□□ -2.06
SRP9P49458 RPS4XP8-201ENST00000402039 771 ntBASIC2.16□□□□□ -2.06
SRP9P49458 SFR1P1-201ENST00000403720 688 ntBASIC2.16□□□□□ -2.06
SRP9P49458 MTATP6P31-201ENST00000406985 692 ntBASIC2.16□□□□□ -2.06
SRP9P49458 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.16□□□□□ -2.06
SRP9P49458 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP9P49458 MTCO2P17-201ENST00000424336 677 ntBASIC2.16□□□□□ -2.06
SRP9P49458 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.16□□□□□ -2.06
SRP9P49458 AC098826.1-201ENST00000433943 471 ntBASIC2.16□□□□□ -2.06
SRP9P49458 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.16□□□□□ -2.06
SRP9P49458 PGBD4P3-201ENST00000440731 581 ntBASIC2.16□□□□□ -2.06
SRP9P49458 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.16□□□□□ -2.06
SRP9P49458 SNRPGP6-201ENST00000451124 220 ntBASIC2.16□□□□□ -2.06
SRP9P49458 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.16□□□□□ -2.06
SRP9P49458 AL139109.1-201ENST00000455491 297 ntBASIC2.16□□□□□ -2.06
SRP9P49458 AC093663.2-201ENST00000484625 313 ntBASIC2.16□□□□□ -2.06
SRP9P49458 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP9P49458 AC069306.1-201ENST00000507006 843 ntBASIC2.16□□□□□ -2.06
SRP9P49458 IGKV2D-36-201ENST00000518643 226 ntBASIC2.16□□□□□ -2.06
SRP9P49458 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP9P49458 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP9P49458 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP9P49458 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP9P49458 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP9P49458 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP9P49458 AC087481.2-201ENST00000565492 330 ntBASIC2.16□□□□□ -2.06
SRP9P49458 AMZ2P1-203ENST00000565833 850 ntBASIC2.16□□□□□ -2.06
SRP9P49458 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.16□□□□□ -2.06
SRP9P49458 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.16□□□□□ -2.06
SRP9P49458 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.16□□□□□ -2.06
SRP9P49458 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.16□□□□□ -2.06
SRP9P49458 AF131215.7-201ENST00000602443 707 ntBASIC2.16□□□□□ -2.06
SRP9P49458 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SRP9P49458 U4.3-201ENST00000621047 82 ntBASIC2.16□□□□□ -2.06
SRP9P49458 AC068880.5-201ENST00000624331 290 ntBASIC2.16□□□□□ -2.06
SRP9P49458 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SRP9P49458 AL596028.1-201ENST00000326971 197 ntBASIC2.15□□□□□ -2.07
SRP9P49458 Y_RNA.510-201ENST00000384511 114 ntBASIC2.15□□□□□ -2.07
SRP9P49458 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.15□□□□□ -2.07
SRP9P49458 RNU4-72P-201ENST00000410754 173 ntBASIC2.15□□□□□ -2.07
SRP9P49458 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.15□□□□□ -2.07
SRP9P49458 AF274854.1-201ENST00000413236 615 ntBASIC2.15□□□□□ -2.07
SRP9P49458 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.15□□□□□ -2.07
SRP9P49458 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.15□□□□□ -2.07
SRP9P49458 AL356320.2-201ENST00000417263 507 ntBASIC2.15□□□□□ -2.07
SRP9P49458 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.15□□□□□ -2.07
SRP9P49458 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms