Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MMP13P45452 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
MMP13P45452 RNU6-181P-201ENST00000363225 107 ntBASIC4.12□□□□□ -1.75
MMP13P45452 RNU6-534P-201ENST00000364877 106 ntBASIC4.12□□□□□ -1.75
MMP13P45452 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.12□□□□□ -1.75
MMP13P45452 RNU6-1279P-201ENST00000383917 103 ntBASIC4.12□□□□□ -1.75
MMP13P45452 Y_RNA.409-201ENST00000383990 98 ntBASIC4.12□□□□□ -1.75
MMP13P45452 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
MMP13P45452 RNU6-876P-201ENST00000391295 104 ntBASIC4.12□□□□□ -1.75
MMP13P45452 RHEBP3-201ENST00000411920 351 ntBASIC4.12□□□□□ -1.75
MMP13P45452 BX295541.1-201ENST00000417774 250 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AC245054.1-201ENST00000420944 258 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AL513174.1-201ENST00000423182 629 ntBASIC4.12□□□□□ -1.75
MMP13P45452 USP9YP36-201ENST00000424581 829 ntBASIC4.12□□□□□ -1.75
MMP13P45452 RSL24D1P6-201ENST00000426934 401 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AC009961.2-201ENST00000435771 251 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP13P45452 AC105402.2-201ENST00000438503 358 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.12□□□□□ -1.75
MMP13P45452 MTND6P13-201ENST00000443510 523 ntBASIC4.12□□□□□ -1.75
MMP13P45452 MTCO1P27-201ENST00000448269 226 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AC079448.1-201ENST00000449377 373 ntBASIC4.12□□□□□ -1.75
MMP13P45452 MTND3P10-201ENST00000450967 341 ntBASIC4.12□□□□□ -1.75
MMP13P45452 MEMO1P3-201ENST00000459811 302 ntBASIC4.12□□□□□ -1.75
MMP13P45452 ACTR3P3-201ENST00000480448 893 ntBASIC4.12□□□□□ -1.75
MMP13P45452 RPS29P25-201ENST00000481709 171 ntBASIC4.12□□□□□ -1.75
MMP13P45452 MTCYBP18-201ENST00000501056 747 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP13P45452 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.12□□□□□ -1.75
MMP13P45452 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP13P45452 MTCO1P35-201ENST00000515270 228 ntBASIC4.12□□□□□ -1.75
MMP13P45452 Y_RNA.704-201ENST00000516851 102 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP13P45452 AC022878.1-201ENST00000530684 149 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP13P45452 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP13P45452 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP13P45452 AC090502.2-201ENST00000549267 280 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.12□□□□□ -1.75
MMP13P45452 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP13P45452 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP13P45452 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP13P45452 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP13P45452 AC137800.2-201ENST00000574375 120 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AC008687.2-201ENST00000597865 520 ntBASIC4.12□□□□□ -1.75
MMP13P45452 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.12□□□□□ -1.75
MMP13P45452 PRELID3BP8-201ENST00000604148 295 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AL049634.3-201ENST00000604968 457 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AC008536.2-201ENST00000607284 349 ntBASIC4.12□□□□□ -1.75
MMP13P45452 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.12□□□□□ -1.75
MMP13P45452 AL592295.2-201ENST00000612578 206 ntBASIC4.12□□□□□ -1.75
MMP13P45452 MIR6715B-201ENST00000637172 77 ntBASIC4.12□□□□□ -1.75
MMP13P45452 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.12□□□□□ -1.75
MMP13P45452 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MMP13P45452 RPS4XP5-202ENST00000449995 1334 ntBASIC4.12□□□□□ -1.75
MMP13P45452 MTND4P23-201ENST00000447723 1363 ntBASIC4.12□□□□□ -1.75
MMP13P45452 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
MMP13P45452 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.12□□□□□ -1.75
MMP13P45452 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
MMP13P45452 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.11□□□□□ -1.75
MMP13P45452 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MMP13P45452 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.11□□□□□ -1.75
MMP13P45452 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MMP13P45452 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MMP13P45452 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MMP13P45452 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
MMP13P45452 RNU6-115P-201ENST00000364310 107 ntBASIC4.11□□□□□ -1.75
MMP13P45452 AL121972.1-201ENST00000402023 252 ntBASIC4.11□□□□□ -1.75
MMP13P45452 GSTA9P-201ENST00000406231 611 ntBASIC4.11□□□□□ -1.75
MMP13P45452 Z98941.1-201ENST00000407764 100 ntBASIC4.11□□□□□ -1.75
MMP13P45452 RNA5SP317-201ENST00000410176 116 ntBASIC4.11□□□□□ -1.75
MMP13P45452 RNA5SP311-201ENST00000411290 116 ntBASIC4.11□□□□□ -1.75
MMP13P45452 RAB28P1-201ENST00000411517 641 ntBASIC4.11□□□□□ -1.75
MMP13P45452 AL356095.1-201ENST00000417217 199 ntBASIC4.11□□□□□ -1.75
MMP13P45452 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.11□□□□□ -1.75
MMP13P45452 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.11□□□□□ -1.75
MMP13P45452 MTND4LP16-201ENST00000440828 295 ntBASIC4.11□□□□□ -1.75
MMP13P45452 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.11□□□□□ -1.75
MMP13P45452 AP000542.1-201ENST00000448473 371 ntBASIC4.11□□□□□ -1.75
MMP13P45452 NDUFS5P3-201ENST00000450668 321 ntBASIC4.11□□□□□ -1.75
MMP13P45452 NDUFA5P7-201ENST00000452914 242 ntBASIC4.11□□□□□ -1.75
MMP13P45452 RPS15AP1-201ENST00000457423 391 ntBASIC4.11□□□□□ -1.75
MMP13P45452 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.11□□□□□ -1.75
MMP13P45452 OR5H5P-201ENST00000503164 928 ntBASIC4.11□□□□□ -1.75
MMP13P45452 AC026726.1-201ENST00000512859 601 ntBASIC4.11□□□□□ -1.75
MMP13P45452 AC046134.1-201ENST00000514454 666 ntBASIC4.11□□□□□ -1.75
MMP13P45452 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.11□□□□□ -1.75
MMP13P45452 RNU6-202P-201ENST00000515998 96 ntBASIC4.11□□□□□ -1.75
MMP13P45452 RNA5SP315-201ENST00000516340 116 ntBASIC4.11□□□□□ -1.75
MMP13P45452 RNU6-358P-201ENST00000516564 75 ntBASIC4.11□□□□□ -1.75
MMP13P45452 RNA5SP312-201ENST00000517068 116 ntBASIC4.11□□□□□ -1.75
MMP13P45452 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.11□□□□□ -1.75
MMP13P45452 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.11□□□□□ -1.75
MMP13P45452 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.11□□□□□ -1.75
MMP13P45452 FAM92A1P1-201ENST00000528023 890 ntBASIC4.11□□□□□ -1.75
MMP13P45452 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.11□□□□□ -1.75
MMP13P45452 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.11□□□□□ -1.75
MMP13P45452 AL389895.1-201ENST00000554127 252 ntBASIC4.11□□□□□ -1.75
MMP13P45452 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.11□□□□□ -1.75
MMP13P45452 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms