Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNA4P43681 SCARNA18-201ENST00000459004 134 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 AC116533.1-201ENST00000459748 321 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 DYNLL1P5-201ENST00000467158 270 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 RPL23AP71-201ENST00000470966 469 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 SNRPCP3-201ENST00000474888 476 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNA4P43681 AP002812.1-201ENST00000495378 474 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNA4P43681 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNA4P43681 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNA4P43681 COX6B1P6-201ENST00000522347 255 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA4P43681 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.4□□□□□ -1.54
CHRNA4P43681 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.4□□□□□ -1.54
CHRNA4P43681 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA4P43681 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.4□□□□□ -1.54
CHRNA4P43681 AC006600.1-201ENST00000572529 153 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 RN7SL290P-201ENST00000578661 300 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 MIR3941-201ENST00000582572 103 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 AC008687.2-201ENST00000597865 520 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA4P43681 AC002044.1-201ENST00000606707 158 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CHRNA4P43681 AC109583.2-201ENST00000617367 129 ntBASIC5.4□□□□□ -1.54
CHRNA4P43681 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.4□□□□□ -1.54
CHRNA4P43681 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA4P43681 AC009313.2-201ENST00000417893 1941 ntBASIC5.4□□□□□ -1.55
CHRNA4P43681 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA4P43681 AC005183.1-201ENST00000603687 1979 ntBASIC5.4□□□□□ -1.55
CHRNA4P43681 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA4P43681 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA4P43681 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA4P43681 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA4P43681 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA4P43681 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.4□□□□□ -1.55
CHRNA4P43681 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA4P43681 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA4P43681 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.4□□□□□ -1.55
CHRNA4P43681 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHRNA4P43681 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CHRNA4P43681 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CHRNA4P43681 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA4P43681 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA4P43681 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CHRNA4P43681 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA4P43681 AL034549.2-201ENST00000618285 3373 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNA4P43681 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA4P43681 MIR323A-201ENST00000362199 86 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 RNU6-1287P-201ENST00000362914 107 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 Y_RNA.277-201ENST00000364754 102 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 RNU6-842P-201ENST00000384269 107 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 RNU6-611P-201ENST00000384276 104 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 RNU6-1060P-201ENST00000384664 107 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 RNU6-1154P-201ENST00000391001 104 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 EIF5P1-201ENST00000400019 1231 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 AL590290.1-201ENST00000405336 380 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 AL445189.1-201ENST00000405722 338 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 Y_RNA.629-201ENST00000411368 105 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 CHEK2P5-201ENST00000423877 246 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 RPL23AP69-201ENST00000431134 458 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.39□□□□□ -1.55
CHRNA4P43681 AC090804.1-201ENST00000448870 490 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 RPL7P6-201ENST00000480903 738 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 UBA52P3-201ENST00000491303 382 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.39□□□□□ -1.55
CHRNA4P43681 RNU6-1332P-201ENST00000516666 104 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 RNU6-861P-201ENST00000516745 106 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.39□□□□□ -1.55
CHRNA4P43681 AC051619.2-201ENST00000559063 397 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 RPL10P14-201ENST00000565265 298 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 AC005341.1-201ENST00000571086 708 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 VN1R91P-201ENST00000594377 169 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 AL355877.2-201ENST00000603670 358 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 AC245517.5-201ENST00000611529 162 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 MIR7973-1-201ENST00000614683 76 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA4P43681 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.39□□□□□ -1.55
CHRNA4P43681 AC025034.2-201ENST00000623264 286 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA4P43681 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA4P43681 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CHRNA4P43681 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
CHRNA4P43681 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CHRNA4P43681 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA4P43681 AC097063.1-201ENST00000426714 1797 ntBASIC5.39□□□□□ -1.55
CHRNA4P43681 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA4P43681 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.39□□□□□ -1.55
CHRNA4P43681 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHRNA4P43681 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
CHRNA4P43681 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRNA4P43681 AC007342.5-201ENST00000571340 2142 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA4P43681 AC134882.1-201ENST00000603738 1676 ntBASIC5.38□□□□□ -1.55
CHRNA4P43681 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA4P43681 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA4P43681 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRNA4P43681 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.38□□□□□ -1.55
CHRNA4P43681 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms