Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HTTP42858 PWAR6-201ENST00000552334 4618 ntBASIC1.98□□□□□ -2.09
HTTP42858 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.98□□□□□ -2.09
HTTP42858 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
HTTP42858 AC087441.2-201ENST00000529141 262 ntBASIC1.98□□□□□ -2.09
HTTP42858 AL592437.2-201ENST00000421655 2434 ntBASIC1.98□□□□□ -2.09
HTTP42858 Y_RNA.30-201ENST00000362572 97 ntBASIC1.97□□□□□ -2.09
HTTP42858 SNORA7.1-201ENST00000363750 139 ntBASIC1.97□□□□□ -2.09
HTTP42858 ARL4AP2-201ENST00000507378 601 ntBASIC1.97□□□□□ -2.09
HTTP42858 TPMTP1-201ENST00000592307 737 ntBASIC1.97□□□□□ -2.09
HTTP42858 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.97□□□□□ -2.09
HTTP42858 AC110741.2-201ENST00000605278 268 ntBASIC1.97□□□□□ -2.09
HTTP42858 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.97□□□□□ -2.09
HTTP42858 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HTTP42858 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
HTTP42858 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HTTP42858 HSPE1P28-201ENST00000443139 211 ntBASIC1.97□□□□□ -2.09
HTTP42858 MTCYBP17-201ENST00000503579 789 ntBASIC1.97□□□□□ -2.09
HTTP42858 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.97□□□□□ -2.09
HTTP42858 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HTTP42858 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
HTTP42858 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
HTTP42858 UBE2L2-201ENST00000254302 429 ntBASIC1.97□□□□□ -2.09
HTTP42858 U3.37-201ENST00000408528 213 ntBASIC1.97□□□□□ -2.09
HTTP42858 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.97□□□□□ -2.09
HTTP42858 RNA5SP296-201ENST00000410523 111 ntBASIC1.97□□□□□ -2.09
HTTP42858 AC092155.2-201ENST00000454675 477 ntBASIC1.97□□□□□ -2.09
HTTP42858 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.97□□□□□ -2.09
HTTP42858 MIR6073-201ENST00000352083 89 ntBASIC1.96□□□□□ -2.1
HTTP42858 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.96□□□□□ -2.1
HTTP42858 AC008526.1-201ENST00000509149 338 ntBASIC1.96□□□□□ -2.1
HTTP42858 CBX3P5-201ENST00000552017 521 ntBASIC1.96□□□□□ -2.1
HTTP42858 RPL21P5-201ENST00000554662 472 ntBASIC1.96□□□□□ -2.1
HTTP42858 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.96□□□□□ -2.1
HTTP42858 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC1.96□□□□□ -2.1
HTTP42858 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
HTTP42858 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.96□□□□□ -2.1
HTTP42858 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.96□□□□□ -2.1
HTTP42858 ZNF720P1-201ENST00000562403 1939 ntBASIC1.96□□□□□ -2.1
HTTP42858 RAC1P3-201ENST00000416129 580 ntBASIC1.96□□□□□ -2.1
HTTP42858 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.96□□□□□ -2.1
HTTP42858 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.96□□□□□ -2.1
HTTP42858 AL451049.1-201ENST00000608672 497 ntBASIC1.96□□□□□ -2.1
HTTP42858 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC1.96□□□□□ -2.1
HTTP42858 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.96□□□□□ -2.1
HTTP42858 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.95□□□□□ -2.1
HTTP42858 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.95□□□□□ -2.1
HTTP42858 AC011604.1-201ENST00000545978 196 ntBASIC1.95□□□□□ -2.1
HTTP42858 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HTTP42858 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
HTTP42858 PAICSP7-201ENST00000419829 962 ntBASIC1.95□□□□□ -2.1
HTTP42858 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC1.95□□□□□ -2.1
HTTP42858 PDCL2P2-201ENST00000533651 189 ntBASIC1.95□□□□□ -2.1
HTTP42858 MTCYBP31-201ENST00000438855 1122 ntBASIC1.95□□□□□ -2.1
HTTP42858 BNIP3P2-201ENST00000441221 577 ntBASIC1.95□□□□□ -2.1
HTTP42858 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC1.95□□□□□ -2.1
HTTP42858 HMGB3P15-201ENST00000507326 574 ntBASIC1.95□□□□□ -2.1
HTTP42858 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.95□□□□□ -2.1
HTTP42858 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.95□□□□□ -2.1
HTTP42858 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.95□□□□□ -2.1
HTTP42858 OR4H12P-201ENST00000556269 907 ntBASIC1.95□□□□□ -2.1
HTTP42858 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
HTTP42858 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
HTTP42858 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HTTP42858 AC093151.1-201ENST00000427711 313 ntBASIC1.94□□□□□ -2.1
HTTP42858 AC107393.1-201ENST00000512403 346 ntBASIC1.94□□□□□ -2.1
HTTP42858 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.94□□□□□ -2.1
HTTP42858 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.94□□□□□ -2.1
HTTP42858 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.94□□□□□ -2.1
HTTP42858 AC234775.3-201ENST00000564612 656 ntBASIC1.94□□□□□ -2.1
HTTP42858 NF1P5-201ENST00000588287 448 ntBASIC1.94□□□□□ -2.1
HTTP42858 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HTTP42858 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.94□□□□□ -2.1
HTTP42858 RNA5SP37-201ENST00000365420 130 ntBASIC1.94□□□□□ -2.1
HTTP42858 COX6CP5-201ENST00000527162 228 ntBASIC1.94□□□□□ -2.1
HTTP42858 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC1.94□□□□□ -2.1
HTTP42858 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.94□□□□□ -2.1
HTTP42858 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
HTTP42858 AC009969.1-201ENST00000438726 172 ntBASIC1.93□□□□□ -2.1
HTTP42858 RPL23AP20-201ENST00000447965 421 ntBASIC1.93□□□□□ -2.1
HTTP42858 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.93□□□□□ -2.1
HTTP42858 HMGN1P7-201ENST00000491722 313 ntBASIC1.93□□□□□ -2.1
HTTP42858 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.93□□□□□ -2.1
HTTP42858 MTND5P27-201ENST00000428871 1720 ntBASIC1.93□□□□□ -2.1
HTTP42858 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
HTTP42858 RNU6-1027P-201ENST00000383998 107 ntBASIC1.93□□□□□ -2.1
HTTP42858 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.93□□□□□ -2.1
HTTP42858 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.93□□□□□ -2.1
HTTP42858 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.93□□□□□ -2.1
HTTP42858 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
HTTP42858 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.93□□□□□ -2.1
HTTP42858 AL355578.1-201ENST00000607405 1328 ntBASIC1.93□□□□□ -2.1
HTTP42858 Z98749.2-208ENST00000381646 500 ntBASIC1.93□□□□□ -2.1
HTTP42858 TAS2R15P-201ENST00000390674 928 ntBASIC1.93□□□□□ -2.1
HTTP42858 AL035405.1-201ENST00000400795 710 ntBASIC1.93□□□□□ -2.1
HTTP42858 RNA5SP38-201ENST00000410750 119 ntBASIC1.93□□□□□ -2.1
HTTP42858 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.93□□□□□ -2.1
HTTP42858 AMD1P1-201ENST00000457220 922 ntBASIC1.93□□□□□ -2.1
HTTP42858 RPS15AP36-201ENST00000492022 382 ntBASIC1.93□□□□□ -2.1
HTTP42858 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms