Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RXRBP28702 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RXRBP28702 CPHL1P-201ENST00000461341 3407 ntBASIC5.83□□□□□ -1.48
RXRBP28702 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.83□□□□□ -1.48
RXRBP28702 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.83□□□□□ -1.48
RXRBP28702 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RXRBP28702 RNU5E-1-201ENST00000362477 120 ntBASIC5.83□□□□□ -1.48
RXRBP28702 Y_RNA.395-201ENST00000383945 109 ntBASIC5.83□□□□□ -1.48
RXRBP28702 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RXRBP28702 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.83□□□□□ -1.48
RXRBP28702 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.83□□□□□ -1.48
RXRBP28702 SNRPEP7-201ENST00000438350 220 ntBASIC5.83□□□□□ -1.48
RXRBP28702 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.83□□□□□ -1.48
RXRBP28702 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RXRBP28702 RNU7-136P-201ENST00000458819 69 ntBASIC5.83□□□□□ -1.48
RXRBP28702 AL049873.1-201ENST00000480540 376 ntBASIC5.83□□□□□ -1.48
RXRBP28702 CCDC34P1-201ENST00000507441 517 ntBASIC5.83□□□□□ -1.48
RXRBP28702 RN7SKP289-201ENST00000517244 295 ntBASIC5.83□□□□□ -1.48
RXRBP28702 SUB1P1-201ENST00000524415 382 ntBASIC5.83□□□□□ -1.48
RXRBP28702 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.83□□□□□ -1.48
RXRBP28702 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.83□□□□□ -1.48
RXRBP28702 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.83□□□□□ -1.48
RXRBP28702 FRG2DP-202ENST00000566967 323 ntBASIC5.83□□□□□ -1.48
RXRBP28702 AC006270.2-201ENST00000578523 652 ntBASIC5.83□□□□□ -1.48
RXRBP28702 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.83□□□□□ -1.48
RXRBP28702 7SK.7-201ENST00000603504 247 ntBASIC5.83□□□□□ -1.48
RXRBP28702 AC010591.1-201ENST00000603941 649 ntBASIC5.83□□□□□ -1.48
RXRBP28702 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC5.83□□□□□ -1.48
RXRBP28702 AC078899.5-201ENST00000612475 178 ntBASIC5.83□□□□□ -1.48
RXRBP28702 MIR6133-201ENST00000617057 108 ntBASIC5.83□□□□□ -1.48
RXRBP28702 MIR6852-201ENST00000621699 66 ntBASIC5.83□□□□□ -1.48
RXRBP28702 AL133216.2-202ENST00000634512 349 ntBASIC5.83□□□□□ -1.48
RXRBP28702 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.83□□□□□ -1.48
RXRBP28702 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RXRBP28702 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RXRBP28702 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.83□□□□□ -1.48
RXRBP28702 AC004656.1-201ENST00000568479 4951 ntBASIC5.83□□□□□ -1.48
RXRBP28702 AL031119.1-201ENST00000404707 1879 ntBASIC5.83□□□□□ -1.48
RXRBP28702 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RXRBP28702 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RXRBP28702 AC004944.1-201ENST00000517807 3059 ntBASIC5.83□□□□□ -1.48
RXRBP28702 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
RXRBP28702 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.82□□□□□ -1.48
RXRBP28702 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RXRBP28702 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RXRBP28702 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RXRBP28702 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
RXRBP28702 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.82□□□□□ -1.48
RXRBP28702 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RXRBP28702 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC5.82□□□□□ -1.48
RXRBP28702 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.82□□□□□ -1.48
RXRBP28702 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RXRBP28702 Y_RNA.31-201ENST00000362574 102 ntBASIC5.82□□□□□ -1.48
RXRBP28702 Y_RNA.231-201ENST00000364358 102 ntBASIC5.82□□□□□ -1.48
RXRBP28702 AL136116.1-201ENST00000403591 381 ntBASIC5.82□□□□□ -1.48
RXRBP28702 AL136131.1-201ENST00000406079 803 ntBASIC5.82□□□□□ -1.48
RXRBP28702 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.82□□□□□ -1.48
RXRBP28702 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.82□□□□□ -1.48
RXRBP28702 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.82□□□□□ -1.48
RXRBP28702 RNU7-27P-201ENST00000459281 62 ntBASIC5.82□□□□□ -1.48
RXRBP28702 HMGN2P26-201ENST00000463169 339 ntBASIC5.82□□□□□ -1.48
RXRBP28702 AC233702.1-201ENST00000482905 502 ntBASIC5.82□□□□□ -1.48
RXRBP28702 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.82□□□□□ -1.48
RXRBP28702 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.82□□□□□ -1.48
RXRBP28702 AC034159.1-201ENST00000513885 583 ntBASIC5.82□□□□□ -1.48
RXRBP28702 AC093677.1-201ENST00000514414 678 ntBASIC5.82□□□□□ -1.48
RXRBP28702 RNU1-95P-201ENST00000516357 160 ntBASIC5.82□□□□□ -1.48
RXRBP28702 RNA5SP519-201ENST00000516480 119 ntBASIC5.82□□□□□ -1.48
RXRBP28702 RNU1-128P-201ENST00000516704 160 ntBASIC5.82□□□□□ -1.48
RXRBP28702 RNU6-201P-201ENST00000517100 61 ntBASIC5.82□□□□□ -1.48
RXRBP28702 Y_RNA.718-201ENST00000517110 102 ntBASIC5.82□□□□□ -1.48
RXRBP28702 AC022616.6-201ENST00000520479 119 ntBASIC5.82□□□□□ -1.48
RXRBP28702 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.82□□□□□ -1.48
RXRBP28702 AC110588.1-201ENST00000559699 137 ntBASIC5.82□□□□□ -1.48
RXRBP28702 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.82□□□□□ -1.48
RXRBP28702 POLR3GP2-201ENST00000588366 668 ntBASIC5.82□□□□□ -1.48
RXRBP28702 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
RXRBP28702 AL627309.6-201ENST00000606857 840 ntBASIC5.82□□□□□ -1.48
RXRBP28702 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.82□□□□□ -1.48
RXRBP28702 MIR6500-201ENST00000622700 86 ntBASIC5.82□□□□□ -1.48
RXRBP28702 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.82□□□□□ -1.48
RXRBP28702 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RXRBP28702 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.82□□□□□ -1.48
RXRBP28702 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RXRBP28702 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RXRBP28702 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.82□□□□□ -1.48
RXRBP28702 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
RXRBP28702 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RXRBP28702 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RXRBP28702 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RXRBP28702 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RXRBP28702 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RXRBP28702 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
RXRBP28702 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RXRBP28702 RNF6P1-201ENST00000444889 1784 ntBASIC5.81□□□□□ -1.48
RXRBP28702 Y_RNA.401-201ENST00000383965 117 ntBASIC5.81□□□□□ -1.48
RXRBP28702 RNU6-639P-201ENST00000384074 107 ntBASIC5.81□□□□□ -1.48
RXRBP28702 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RXRBP28702 BTBD10P2-201ENST00000404779 676 ntBASIC5.81□□□□□ -1.48
RXRBP28702 RNU2-8P-201ENST00000410727 190 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms