Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH3P22223 RNA5SP56-201ENST00000410277 118 ntBASIC3.54□□□□□ -1.84
CDH3P22223 ATP5A1P2-201ENST00000412323 255 ntBASIC3.54□□□□□ -1.84
CDH3P22223 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH3P22223 RPS29P4-201ENST00000414733 161 ntBASIC3.54□□□□□ -1.84
CDH3P22223 HMGB3P23-201ENST00000414981 585 ntBASIC3.54□□□□□ -1.84
CDH3P22223 AC017079.2-201ENST00000416102 485 ntBASIC3.54□□□□□ -1.84
CDH3P22223 HMGB3P20-201ENST00000417997 600 ntBASIC3.54□□□□□ -1.84
CDH3P22223 TOMM22P1-201ENST00000418578 312 ntBASIC3.54□□□□□ -1.84
CDH3P22223 MTND2P18-201ENST00000419962 1030 ntBASIC3.54□□□□□ -1.84
CDH3P22223 RPL7P30-201ENST00000420888 709 ntBASIC3.54□□□□□ -1.84
CDH3P22223 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.54□□□□□ -1.84
CDH3P22223 ZYG11AP1-201ENST00000430329 837 ntBASIC3.54□□□□□ -1.84
CDH3P22223 RPL23AP74-201ENST00000437246 471 ntBASIC3.54□□□□□ -1.84
CDH3P22223 OR6K5P-201ENST00000447050 945 ntBASIC3.54□□□□□ -1.84
CDH3P22223 AC010655.1-201ENST00000449336 292 ntBASIC3.54□□□□□ -1.84
CDH3P22223 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH3P22223 AP002884.2-201ENST00000471647 395 ntBASIC3.54□□□□□ -1.84
CDH3P22223 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH3P22223 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.54□□□□□ -1.84
CDH3P22223 RNU6-150P-201ENST00000516237 95 ntBASIC3.54□□□□□ -1.84
CDH3P22223 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.54□□□□□ -1.84
CDH3P22223 AC037471.2-201ENST00000564941 598 ntBASIC3.54□□□□□ -1.84
CDH3P22223 MIR4444-1-201ENST00000581696 74 ntBASIC3.54□□□□□ -1.84
CDH3P22223 MIR4444-2-201ENST00000584390 74 ntBASIC3.54□□□□□ -1.84
CDH3P22223 VN1R92P-201ENST00000598511 928 ntBASIC3.54□□□□□ -1.84
CDH3P22223 RPL23AP92-201ENST00000603609 255 ntBASIC3.54□□□□□ -1.84
CDH3P22223 AP000811.1-201ENST00000603803 651 ntBASIC3.54□□□□□ -1.84
CDH3P22223 AC010591.1-201ENST00000603941 649 ntBASIC3.54□□□□□ -1.84
CDH3P22223 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH3P22223 MIR6075-201ENST00000620782 95 ntBASIC3.54□□□□□ -1.84
CDH3P22223 AC079248.2-201ENST00000623779 326 ntBASIC3.54□□□□□ -1.84
CDH3P22223 AC079228.1-201ENST00000624774 1049 ntBASIC3.54□□□□□ -1.84
CDH3P22223 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CDH3P22223 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.54□□□□□ -1.84
CDH3P22223 AC119674.1-207ENST00000641355 633 ntBASIC3.54□□□□□ -1.84
CDH3P22223 AC009093.8-201ENST00000641769 292 ntBASIC3.54□□□□□ -1.84
CDH3P22223 MAPK10-362ENST00000641864 4484 ntBASIC3.54□□□□□ -1.84
CDH3P22223 AC010733.2-201ENST00000589496 5702 ntBASIC3.54□□□□□ -1.84
CDH3P22223 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH3P22223 RNU6-263P-201ENST00000363811 107 ntBASIC3.53□□□□□ -1.84
CDH3P22223 RNU6-837P-201ENST00000391056 108 ntBASIC3.53□□□□□ -1.84
CDH3P22223 SNORA48.8-201ENST00000391324 134 ntBASIC3.53□□□□□ -1.84
CDH3P22223 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.53□□□□□ -1.84
CDH3P22223 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH3P22223 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH3P22223 TPMTP2-201ENST00000414372 726 ntBASIC3.53□□□□□ -1.84
CDH3P22223 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.53□□□□□ -1.84
CDH3P22223 AL445567.1-201ENST00000439121 144 ntBASIC3.53□□□□□ -1.84
CDH3P22223 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH3P22223 AC005297.2-201ENST00000450430 606 ntBASIC3.53□□□□□ -1.84
CDH3P22223 RPL23AP35-201ENST00000451906 501 ntBASIC3.53□□□□□ -1.84
CDH3P22223 OR6C5P-201ENST00000452388 923 ntBASIC3.53□□□□□ -1.84
CDH3P22223 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.53□□□□□ -1.84
CDH3P22223 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH3P22223 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH3P22223 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH3P22223 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CDH3P22223 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.53□□□□□ -1.84
CDH3P22223 MTCYBP43-201ENST00000513621 740 ntBASIC3.53□□□□□ -1.84
CDH3P22223 AC090888.1-201ENST00000561335 1141 ntBASIC3.53□□□□□ -1.84
CDH3P22223 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CDH3P22223 AC135628.1-201ENST00000568867 534 ntBASIC3.53□□□□□ -1.84
CDH3P22223 AC090616.2-202ENST00000584248 222 ntBASIC3.53□□□□□ -1.84
CDH3P22223 AL669831.4-202ENST00000590817 238 ntBASIC3.53□□□□□ -1.84
CDH3P22223 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.53□□□□□ -1.84
CDH3P22223 AC004925.1-201ENST00000624256 2706 ntBASIC3.53□□□□□ -1.84
CDH3P22223 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.53□□□□□ -1.85
CDH3P22223 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CDH3P22223 AL079305.1-201ENST00000623159 3008 ntBASIC3.52□□□□□ -1.85
CDH3P22223 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CDH3P22223 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
CDH3P22223 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH3P22223 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CDH3P22223 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH3P22223 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.52□□□□□ -1.85
CDH3P22223 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH3P22223 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH3P22223 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH3P22223 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH3P22223 RPL23AP57-201ENST00000332361 466 ntBASIC3.52□□□□□ -1.85
CDH3P22223 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CDH3P22223 RNU6-433P-201ENST00000363216 104 ntBASIC3.52□□□□□ -1.85
CDH3P22223 RNU6-343P-201ENST00000364709 104 ntBASIC3.52□□□□□ -1.85
CDH3P22223 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CDH3P22223 RNU6-761P-201ENST00000384148 107 ntBASIC3.52□□□□□ -1.85
CDH3P22223 SNORD116-8-201ENST00000384365 95 ntBASIC3.52□□□□□ -1.85
CDH3P22223 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CDH3P22223 RNU6-952P-201ENST00000391164 108 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.52□□□□□ -1.85
CDH3P22223 SYF2P2-201ENST00000417620 583 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AC012065.2-201ENST00000421295 375 ntBASIC3.52□□□□□ -1.85
CDH3P22223 GLRXP1-201ENST00000423261 334 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AL365203.2-201ENST00000423444 196 ntBASIC3.52□□□□□ -1.85
CDH3P22223 MTND4P20-201ENST00000424125 869 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AC234781.2-201ENST00000426370 994 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AL035407.1-201ENST00000429211 571 ntBASIC3.52□□□□□ -1.85
CDH3P22223 MTND1P20-201ENST00000430341 950 ntBASIC3.52□□□□□ -1.85
CDH3P22223 HMGN2P31-201ENST00000432430 273 ntBASIC3.52□□□□□ -1.85
CDH3P22223 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms