Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC3P19447 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.64□□□□□ -1.51
ERCC3P19447 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC3P19447 MTND3P23-201ENST00000431980 347 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC3P19447 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC3P19447 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.64□□□□□ -1.51
ERCC3P19447 PMCHL2-203ENST00000457791 237 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC3P19447 AC021660.1-201ENST00000465006 554 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 RN7SL432P-201ENST00000484057 298 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 RN7SL441P-201ENST00000492388 296 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 AC091951.2-201ENST00000500762 203 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC3P19447 GMPSP1-201ENST00000514075 579 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 RN7SKP92-201ENST00000517266 244 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC3P19447 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC3P19447 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC3P19447 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.64□□□□□ -1.51
ERCC3P19447 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.64□□□□□ -1.51
ERCC3P19447 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC3P19447 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC3P19447 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC3P19447 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC3P19447 UBE2V2P2-201ENST00000587677 504 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 AC011712.1-201ENST00000588959 234 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC3P19447 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC3P19447 AC012443.1-201ENST00000605605 231 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.64□□□□□ -1.51
ERCC3P19447 AC025034.2-201ENST00000623264 286 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.64□□□□□ -1.51
ERCC3P19447 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
ERCC3P19447 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
ERCC3P19447 EXOC5P1-201ENST00000510543 1969 ntBASIC5.64□□□□□ -1.51
ERCC3P19447 RNU6-1029P-201ENST00000384109 107 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC3P19447 RN7SKP106-201ENST00000410832 272 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.63□□□□□ -1.51
ERCC3P19447 AC244098.2-201ENST00000422068 99 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.63□□□□□ -1.51
ERCC3P19447 RPL18P10-201ENST00000425606 538 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.63□□□□□ -1.51
ERCC3P19447 AC090774.1-201ENST00000435925 246 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AL450023.3-201ENST00000440592 271 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC5.63□□□□□ -1.51
ERCC3P19447 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.63□□□□□ -1.51
ERCC3P19447 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.63□□□□□ -1.51
ERCC3P19447 GMFBP1-201ENST00000467831 427 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 MTCYBP18-201ENST00000501056 747 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AC004062.1-201ENST00000509926 645 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.63□□□□□ -1.51
ERCC3P19447 ADI1P3-201ENST00000549509 470 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.63□□□□□ -1.51
ERCC3P19447 NDUFB4P11-201ENST00000560510 395 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 BNIP3P5-201ENST00000562290 498 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 MIR4284-201ENST00000578924 81 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.63□□□□□ -1.51
ERCC3P19447 AL670379.6-201ENST00000603753 252 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AL670379.11-201ENST00000604059 253 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AC008162.1-201ENST00000604718 254 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AL670379.1-201ENST00000604752 252 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AL670379.5-201ENST00000605253 252 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AL670379.12-201ENST00000605291 253 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AL670379.8-201ENST00000605353 252 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AL670379.7-201ENST00000605823 252 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.63□□□□□ -1.51
ERCC3P19447 AC007497.1-201ENST00000610421 561 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC5.63□□□□□ -1.51
ERCC3P19447 AC019206.1-201ENST00000621938 425 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 CR381572.2-201ENST00000624852 397 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.63□□□□□ -1.51
ERCC3P19447 AC099654.5-201ENST00000636479 350 ntBASIC5.63□□□□□ -1.51
ERCC3P19447 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.63□□□□□ -1.51
ERCC3P19447 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.63□□□□□ -1.51
ERCC3P19447 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC3P19447 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
ERCC3P19447 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.63□□□□□ -1.51
ERCC3P19447 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.62□□□□□ -1.51
ERCC3P19447 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.62□□□□□ -1.51
ERCC3P19447 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
ERCC3P19447 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ERCC3P19447 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.62□□□□□ -1.51
ERCC3P19447 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ERCC3P19447 MAPK10-286ENST00000641208 8747 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.62□□□□□ -1.51
ERCC3P19447 AL590240.1-201ENST00000334118 313 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
ERCC3P19447 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 RNU6-629P-201ENST00000384061 103 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 U3.32-201ENST00000408116 212 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 COX5BP7-201ENST00000414780 274 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 TBCAP2-201ENST00000416175 326 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.62□□□□□ -1.51
ERCC3P19447 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.62□□□□□ -1.51
ERCC3P19447 AC073415.1-201ENST00000449240 153 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 AL162395.1-201ENST00000457882 422 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 RPS27AP17-201ENST00000463344 455 ntBASIC5.62□□□□□ -1.51
ERCC3P19447 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms