Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNA5SP210-201ENST00000391034 120 ntBASIC2.92□□□□□ -1.94
TPM1P09493 SNORA48.5-201ENST00000391143 135 ntBASIC2.92□□□□□ -1.94
TPM1P09493 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.92□□□□□ -1.94
TPM1P09493 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.92□□□□□ -1.94
TPM1P09493 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.92□□□□□ -1.94
TPM1P09493 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.92□□□□□ -1.94
TPM1P09493 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.92□□□□□ -1.94
TPM1P09493 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.92□□□□□ -1.94
TPM1P09493 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.92□□□□□ -1.94
TPM1P09493 RPS12P2-201ENST00000439728 269 ntBASIC2.92□□□□□ -1.94
TPM1P09493 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.92□□□□□ -1.94
TPM1P09493 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.92□□□□□ -1.94
TPM1P09493 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.92□□□□□ -1.94
TPM1P09493 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.92□□□□□ -1.94
TPM1P09493 NAP1L1P3-201ENST00000462291 880 ntBASIC2.92□□□□□ -1.94
TPM1P09493 AC126182.1-201ENST00000478134 357 ntBASIC2.92□□□□□ -1.94
TPM1P09493 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.92□□□□□ -1.94
TPM1P09493 RNA5SP402-201ENST00000517148 110 ntBASIC2.92□□□□□ -1.94
TPM1P09493 AC103833.1-201ENST00000517442 172 ntBASIC2.92□□□□□ -1.94
TPM1P09493 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.92□□□□□ -1.94
TPM1P09493 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.92□□□□□ -1.94
TPM1P09493 MIR3609-201ENST00000582661 80 ntBASIC2.92□□□□□ -1.94
TPM1P09493 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.92□□□□□ -1.94
TPM1P09493 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.92□□□□□ -1.94
TPM1P09493 AL161734.1-201ENST00000609720 557 ntBASIC2.92□□□□□ -1.94
TPM1P09493 AC084757.4-201ENST00000616350 526 ntBASIC2.92□□□□□ -1.94
TPM1P09493 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.92□□□□□ -1.94
TPM1P09493 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.92□□□□□ -1.94
TPM1P09493 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.92□□□□□ -1.94
TPM1P09493 AC109315.1-201ENST00000584143 1347 ntBASIC2.92□□□□□ -1.94
TPM1P09493 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
TPM1P09493 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
TPM1P09493 AP000526.1-201ENST00000603308 1388 ntBASIC2.91□□□□□ -1.94
TPM1P09493 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TPM1P09493 MIR627-201ENST00000384979 97 ntBASIC2.91□□□□□ -1.94
TPM1P09493 RNU2-25P-201ENST00000411041 191 ntBASIC2.91□□□□□ -1.94
TPM1P09493 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.91□□□□□ -1.94
TPM1P09493 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.91□□□□□ -1.94
TPM1P09493 AC073901.1-201ENST00000462471 408 ntBASIC2.91□□□□□ -1.94
TPM1P09493 AC074250.1-201ENST00000511117 192 ntBASIC2.91□□□□□ -1.94
TPM1P09493 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.91□□□□□ -1.94
TPM1P09493 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.91□□□□□ -1.94
TPM1P09493 RNU6-416P-201ENST00000516265 103 ntBASIC2.91□□□□□ -1.94
TPM1P09493 RN7SKP40-201ENST00000517211 242 ntBASIC2.91□□□□□ -1.94
TPM1P09493 AC100870.1-201ENST00000522035 505 ntBASIC2.91□□□□□ -1.94
TPM1P09493 ZNF705CP-201ENST00000530515 889 ntBASIC2.91□□□□□ -1.94
TPM1P09493 OR5BN1P-201ENST00000532955 829 ntBASIC2.91□□□□□ -1.94
TPM1P09493 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.91□□□□□ -1.94
TPM1P09493 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
TPM1P09493 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.91□□□□□ -1.94
TPM1P09493 MIR5092-201ENST00000583139 88 ntBASIC2.91□□□□□ -1.94
TPM1P09493 TPMTP1-201ENST00000592307 737 ntBASIC2.91□□□□□ -1.94
TPM1P09493 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.91□□□□□ -1.94
TPM1P09493 AC245389.1-201ENST00000605141 529 ntBASIC2.91□□□□□ -1.94
TPM1P09493 AC012443.1-201ENST00000605605 231 ntBASIC2.91□□□□□ -1.94
TPM1P09493 MIR1264-201ENST00000616374 69 ntBASIC2.91□□□□□ -1.94
TPM1P09493 AC103798.2-201ENST00000624292 632 ntBASIC2.91□□□□□ -1.94
TPM1P09493 AC068880.5-201ENST00000624331 290 ntBASIC2.91□□□□□ -1.94
TPM1P09493 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.9□□□□□ -1.94
TPM1P09493 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
TPM1P09493 RNVU1-14-201ENST00000384770 164 ntBASIC2.9□□□□□ -1.95
TPM1P09493 AC096533.1-201ENST00000411645 353 ntBASIC2.9□□□□□ -1.95
TPM1P09493 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2.9□□□□□ -1.95
TPM1P09493 AC112220.1-201ENST00000434628 355 ntBASIC2.9□□□□□ -1.95
TPM1P09493 AC092170.1-201ENST00000440211 356 ntBASIC2.9□□□□□ -1.95
TPM1P09493 AL929288.2-201ENST00000446368 407 ntBASIC2.9□□□□□ -1.95
TPM1P09493 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.9□□□□□ -1.95
TPM1P09493 AL358832.1-201ENST00000497800 389 ntBASIC2.9□□□□□ -1.95
TPM1P09493 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.9□□□□□ -1.95
TPM1P09493 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.9□□□□□ -1.95
TPM1P09493 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.9□□□□□ -1.95
TPM1P09493 RNU6-27P-201ENST00000516146 107 ntBASIC2.9□□□□□ -1.95
TPM1P09493 SNORA67.7-201ENST00000516664 135 ntBASIC2.9□□□□□ -1.95
TPM1P09493 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.9□□□□□ -1.95
TPM1P09493 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.9□□□□□ -1.95
TPM1P09493 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.9□□□□□ -1.95
TPM1P09493 SNORD39.3-201ENST00000584451 71 ntBASIC2.9□□□□□ -1.95
TPM1P09493 AL731566.2-201ENST00000618971 317 ntBASIC2.9□□□□□ -1.95
TPM1P09493 AC027309.3-201ENST00000623419 351 ntBASIC2.9□□□□□ -1.95
TPM1P09493 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.9□□□□□ -1.95
TPM1P09493 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.9□□□□□ -1.95
TPM1P09493 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TPM1P09493 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
TPM1P09493 AC010680.1-201ENST00000590024 3590 ntBASIC2.89□□□□□ -1.95
TPM1P09493 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TPM1P09493 ARF4P3-201ENST00000397387 509 ntBASIC2.89□□□□□ -1.95
TPM1P09493 AL121978.1-201ENST00000402778 359 ntBASIC2.89□□□□□ -1.95
TPM1P09493 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC2.89□□□□□ -1.95
TPM1P09493 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.89□□□□□ -1.95
TPM1P09493 OR51A3P-201ENST00000413596 924 ntBASIC2.89□□□□□ -1.95
TPM1P09493 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.89□□□□□ -1.95
TPM1P09493 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.89□□□□□ -1.95
TPM1P09493 RPL23AP16-201ENST00000441715 421 ntBASIC2.89□□□□□ -1.95
TPM1P09493 AC007000.2-201ENST00000442564 487 ntBASIC2.89□□□□□ -1.95
TPM1P09493 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.89□□□□□ -1.95
TPM1P09493 MTND5P8-201ENST00000449817 1083 ntBASIC2.89□□□□□ -1.95
TPM1P09493 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.89□□□□□ -1.95
TPM1P09493 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.89□□□□□ -1.95
TPM1P09493 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.89□□□□□ -1.95
TPM1P09493 FAM133DP-201ENST00000464802 691 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms