Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 SNORD21-201ENST00000383953 95 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.78□□□□□ -2.12
SPTA1P02549 AIMP1P1-201ENST00000418670 937 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 RPL7P46-201ENST00000425129 740 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 AC244505.4-201ENST00000434905 287 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 SSXP5-201ENST00000443473 287 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 RPS26P24-201ENST00000497656 331 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 HIGD1AP10-201ENST00000527837 282 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC1.78□□□□□ -2.12
SPTA1P02549 AL845331.3-202ENST00000562856 261 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.78□□□□□ -2.12
SPTA1P02549 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SPTA1P02549 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 AC008264.2-201ENST00000610193 3731 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.78□□□□□ -2.12
SPTA1P02549 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.78□□□□□ -2.12
SPTA1P02549 Y_RNA.393-201ENST00000383936 102 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 VN1R31P-201ENST00000417498 730 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 AL445685.2-201ENST00000422551 342 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 UBE2V1P6-201ENST00000430840 422 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 AC009474.2-201ENST00000451383 136 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 RPS27P27-201ENST00000498779 255 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.78□□□□□ -2.12
SPTA1P02549 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC1.78□□□□□ -2.12
SPTA1P02549 AC023043.3-201ENST00000593113 385 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.78□□□□□ -2.12
SPTA1P02549 AL512598.1-201ENST00000610158 273 ntBASIC1.78□□□□□ -2.12
SPTA1P02549 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.78□□□□□ -2.13
SPTA1P02549 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
SPTA1P02549 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SPTA1P02549 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.77□□□□□ -2.13
SPTA1P02549 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.77□□□□□ -2.13
SPTA1P02549 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.77□□□□□ -2.13
SPTA1P02549 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.77□□□□□ -2.13
SPTA1P02549 MTCO3P13-201ENST00000577757 781 ntBASIC1.77□□□□□ -2.13
SPTA1P02549 MIR6733-201ENST00000635723 61 ntBASIC1.77□□□□□ -2.13
SPTA1P02549 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SPTA1P02549 AL450326.2-201ENST00000421913 1962 ntBASIC1.77□□□□□ -2.13
SPTA1P02549 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC1.77□□□□□ -2.13
SPTA1P02549 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
SPTA1P02549 AC003989.2-201ENST00000440224 169 ntBASIC1.77□□□□□ -2.13
SPTA1P02549 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.77□□□□□ -2.13
SPTA1P02549 DCAF13P1-201ENST00000495256 1330 ntBASIC1.77□□□□□ -2.13
SPTA1P02549 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.76□□□□□ -2.13
SPTA1P02549 DDX10P1-201ENST00000448545 1933 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 Z98749.2-208ENST00000381646 500 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 RNU2-32P-201ENST00000411193 191 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.76□□□□□ -2.13
SPTA1P02549 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.76□□□□□ -2.13
SPTA1P02549 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.76□□□□□ -2.13
SPTA1P02549 MTCYBP19-201ENST00000517463 1124 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.76□□□□□ -2.13
SPTA1P02549 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.76□□□□□ -2.13
SPTA1P02549 AL389895.1-201ENST00000554127 252 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 MYL12BP1-201ENST00000569826 507 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 AC099778.2-201ENST00000610904 211 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
SPTA1P02549 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SPTA1P02549 AC066616.2-201ENST00000559334 1481 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
SPTA1P02549 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
SPTA1P02549 NDUFB4P5-201ENST00000415445 361 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC1.76□□□□□ -2.13
SPTA1P02549 ATP5F1P1-201ENST00000433775 569 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC1.76□□□□□ -2.13
SPTA1P02549 IGHV3-76-201ENST00000522465 295 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 CBX3P5-201ENST00000552017 521 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.76□□□□□ -2.13
SPTA1P02549 AC092650.2-201ENST00000619984 902 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
SPTA1P02549 AC091953.2-201ENST00000623979 160 ntBASIC1.76□□□□□ -2.13
SPTA1P02549 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
SPTA1P02549 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC1.75□□□□□ -2.13
SPTA1P02549 FABP5P13-201ENST00000452144 328 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.75□□□□□ -2.13
SPTA1P02549 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.75□□□□□ -2.13
SPTA1P02549 SNORA70.14-201ENST00000516205 110 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SPTA1P02549 AP002748.2-201ENST00000528671 348 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.75□□□□□ -2.13
SPTA1P02549 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.75□□□□□ -2.13
SPTA1P02549 MIR151B-201ENST00000584249 96 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
SPTA1P02549 MTND5P27-201ENST00000428871 1720 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 PNPT1P2-201ENST00000456768 2050 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SPTA1P02549 AC019155.1-201ENST00000382242 574 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 SNORA51.12-201ENST00000384448 134 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
SPTA1P02549 SNORD88.1-201ENST00000408684 91 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 AL022400.1-201ENST00000423946 935 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 RWDD4P2-201ENST00000426392 563 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 RWDD4P1-201ENST00000488019 565 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 SUMO2P4-201ENST00000504193 276 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.75□□□□□ -2.13
SPTA1P02549 AC098848.2-201ENST00000588023 330 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 AL645944.1-201ENST00000603857 493 ntBASIC1.75□□□□□ -2.13
SPTA1P02549 LRRC77P-213ENST00000637727 880 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms