Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.9□□□□□ -1.95
POLR1AO95602 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.89□□□□□ -1.95
POLR1AO95602 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
POLR1AO95602 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
POLR1AO95602 AC109583.1-201ENST00000432156 268 ntBASIC2.88□□□□□ -1.95
POLR1AO95602 FABP5P13-201ENST00000452144 328 ntBASIC2.88□□□□□ -1.95
POLR1AO95602 SNORA31.11-201ENST00000516528 139 ntBASIC2.88□□□□□ -1.95
POLR1AO95602 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.88□□□□□ -1.95
POLR1AO95602 AL356280.1-201ENST00000603614 379 ntBASIC2.88□□□□□ -1.95
POLR1AO95602 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.88□□□□□ -1.95
POLR1AO95602 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
POLR1AO95602 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
POLR1AO95602 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.88□□□□□ -1.95
POLR1AO95602 SNORA51.11-201ENST00000384442 131 ntBASIC2.88□□□□□ -1.95
POLR1AO95602 AL627390.1-201ENST00000396055 340 ntBASIC2.88□□□□□ -1.95
POLR1AO95602 AP000275.1-201ENST00000411943 390 ntBASIC2.88□□□□□ -1.95
POLR1AO95602 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.88□□□□□ -1.95
POLR1AO95602 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.88□□□□□ -1.95
POLR1AO95602 AC006483.1-201ENST00000487308 313 ntBASIC2.88□□□□□ -1.95
POLR1AO95602 AC010546.1-201ENST00000569391 485 ntBASIC2.88□□□□□ -1.95
POLR1AO95602 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.88□□□□□ -1.95
POLR1AO95602 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.87□□□□□ -1.95
POLR1AO95602 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.87□□□□□ -1.95
POLR1AO95602 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.87□□□□□ -1.95
POLR1AO95602 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR1AO95602 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.87□□□□□ -1.95
POLR1AO95602 RNU6-84P-201ENST00000607737 102 ntBASIC2.87□□□□□ -1.95
POLR1AO95602 RPL23AP61-201ENST00000623642 466 ntBASIC2.87□□□□□ -1.95
POLR1AO95602 AC090897.3-201ENST00000636973 1157 ntBASIC2.87□□□□□ -1.95
POLR1AO95602 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
POLR1AO95602 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.86□□□□□ -1.95
POLR1AO95602 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.86□□□□□ -1.95
POLR1AO95602 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.86□□□□□ -1.95
POLR1AO95602 AL590664.1-201ENST00000448065 339 ntBASIC2.86□□□□□ -1.95
POLR1AO95602 MTCO1P42-201ENST00000457379 726 ntBASIC2.86□□□□□ -1.95
POLR1AO95602 TRMT112P2-201ENST00000512910 132 ntBASIC2.86□□□□□ -1.95
POLR1AO95602 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.86□□□□□ -1.95
POLR1AO95602 VIS1.1-201ENST00000610517 203 ntBASIC2.86□□□□□ -1.95
POLR1AO95602 AL121594.5-201ENST00000631724 573 ntBASIC2.86□□□□□ -1.95
POLR1AO95602 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
POLR1AO95602 Y_RNA.122-201ENST00000363331 96 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 RPL23AP16-201ENST00000441715 421 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR1AO95602 RPS29P11-201ENST00000496507 171 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 RPL23AP63-201ENST00000498752 471 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
POLR1AO95602 RNA5SP480-201ENST00000516840 109 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1AO95602 AC073387.2-201ENST00000604797 784 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 AC092650.2-201ENST00000619984 902 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR1AO95602 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.85□□□□□ -1.95
POLR1AO95602 AL353746.1-201ENST00000566293 6881 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.85□□□□□ -1.95
POLR1AO95602 RPL23AP58-201ENST00000440453 469 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR1AO95602 snoZ278.1-201ENST00000517059 112 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 RNA5SP490-201ENST00000517141 136 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1AO95602 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.85□□□□□ -1.95
POLR1AO95602 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.85□□□□□ -1.95
POLR1AO95602 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.85□□□□□ -1.95
POLR1AO95602 AC084768.2-201ENST00000622736 221 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 AC092159.4-201ENST00000624944 550 ntBASIC2.85□□□□□ -1.95
POLR1AO95602 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.84□□□□□ -1.95
POLR1AO95602 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.84□□□□□ -1.95
POLR1AO95602 MTND5P23-201ENST00000430812 1655 ntBASIC2.84□□□□□ -1.95
POLR1AO95602 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
POLR1AO95602 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.84□□□□□ -1.95
POLR1AO95602 SNORA67.5-201ENST00000391036 107 ntBASIC2.84□□□□□ -1.96
POLR1AO95602 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.84□□□□□ -1.96
POLR1AO95602 DPPA2P1-201ENST00000428060 556 ntBASIC2.84□□□□□ -1.96
POLR1AO95602 AL157827.1-201ENST00000447622 132 ntBASIC2.84□□□□□ -1.96
POLR1AO95602 TMEM248P1-201ENST00000510579 951 ntBASIC2.84□□□□□ -1.96
POLR1AO95602 LRRC37A5P-203ENST00000580181 585 ntBASIC2.84□□□□□ -1.96
POLR1AO95602 RPAP2P1-201ENST00000603626 1168 ntBASIC2.84□□□□□ -1.96
POLR1AO95602 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.84□□□□□ -1.96
POLR1AO95602 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR1AO95602 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.83□□□□□ -1.96
POLR1AO95602 MLLT10P2-201ENST00000506434 249 ntBASIC2.83□□□□□ -1.96
POLR1AO95602 HMGB1P1-201ENST00000522557 636 ntBASIC2.83□□□□□ -1.96
POLR1AO95602 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR1AO95602 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.83□□□□□ -1.96
POLR1AO95602 PSMA6P4-201ENST00000603247 718 ntBASIC2.83□□□□□ -1.96
POLR1AO95602 AC104307.1-201ENST00000616142 196 ntBASIC2.83□□□□□ -1.96
POLR1AO95602 AC010872.1-201ENST00000624225 675 ntBASIC2.83□□□□□ -1.96
POLR1AO95602 AC027514.1-201ENST00000588561 1603 ntBASIC2.83□□□□□ -1.96
POLR1AO95602 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
POLR1AO95602 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
POLR1AO95602 MIRLET7G-201ENST00000362280 84 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 AL021407.1-201ENST00000404531 386 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 WARS2P1-201ENST00000429678 537 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 AL590762.3-201ENST00000436372 640 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 AC092473.1-201ENST00000441098 221 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 AL591719.1-201ENST00000444669 744 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 RPL23AP20-201ENST00000447965 421 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.82□□□□□ -1.96
POLR1AO95602 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.82□□□□□ -1.96
POLR1AO95602 RPS3AP4-201ENST00000555161 764 ntBASIC2.82□□□□□ -1.96
POLR1AO95602 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms