Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 TAB3P1-202ENST00000452645 1634 ntBASIC3.48□□□□□ -1.85
SIX3O95343 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX3O95343 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIX3O95343 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SIX3O95343 AC007823.1-201ENST00000569932 1566 ntBASIC3.47□□□□□ -1.85
SIX3O95343 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
SIX3O95343 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIX3O95343 RNA5SP51-201ENST00000364750 119 ntBASIC3.47□□□□□ -1.85
SIX3O95343 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX3O95343 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIX3O95343 MIR591-201ENST00000385290 95 ntBASIC3.47□□□□□ -1.85
SIX3O95343 AC007066.1-201ENST00000392902 381 ntBASIC3.47□□□□□ -1.85
SIX3O95343 AC109780.2-201ENST00000413467 845 ntBASIC3.47□□□□□ -1.85
SIX3O95343 AC017079.2-201ENST00000416102 485 ntBASIC3.47□□□□□ -1.85
SIX3O95343 DBIP2-201ENST00000419076 262 ntBASIC3.47□□□□□ -1.85
SIX3O95343 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.47□□□□□ -1.85
SIX3O95343 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX3O95343 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 ANKRD26P4-201ENST00000455755 950 ntBASIC3.47□□□□□ -1.85
SIX3O95343 RPS29P2-201ENST00000479278 136 ntBASIC3.47□□□□□ -1.85
SIX3O95343 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX3O95343 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX3O95343 MTCYBP43-201ENST00000513621 740 ntBASIC3.47□□□□□ -1.85
SIX3O95343 RNA5SP216-201ENST00000516111 123 ntBASIC3.47□□□□□ -1.85
SIX3O95343 SNORA70.18-201ENST00000516696 98 ntBASIC3.47□□□□□ -1.85
SIX3O95343 NDUFB9P3-201ENST00000521269 501 ntBASIC3.47□□□□□ -1.85
SIX3O95343 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 AC026333.2-201ENST00000542164 106 ntBASIC3.47□□□□□ -1.85
SIX3O95343 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
SIX3O95343 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX3O95343 BDH2P1-201ENST00000602288 736 ntBASIC3.47□□□□□ -1.85
SIX3O95343 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.47□□□□□ -1.85
SIX3O95343 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX3O95343 TUSC7.1-201ENST00000610969 165 ntBASIC3.47□□□□□ -1.85
SIX3O95343 AL390240.1-201ENST00000612950 384 ntBASIC3.47□□□□□ -1.85
SIX3O95343 AL110115.1-201ENST00000614396 364 ntBASIC3.47□□□□□ -1.85
SIX3O95343 PLCE1P1-201ENST00000622094 305 ntBASIC3.47□□□□□ -1.85
SIX3O95343 AC008443.7-201ENST00000622195 246 ntBASIC3.47□□□□□ -1.85
SIX3O95343 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX3O95343 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX3O95343 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX3O95343 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
SIX3O95343 AC138915.3-201ENST00000562908 1389 ntBASIC3.47□□□□□ -1.85
SIX3O95343 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX3O95343 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.47□□□□□ -1.85
SIX3O95343 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SIX3O95343 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
SIX3O95343 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
SIX3O95343 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
SIX3O95343 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
SIX3O95343 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.85
SIX3O95343 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SIX3O95343 AC005832.2-201ENST00000538921 1430 ntBASIC3.46□□□□□ -1.86
SIX3O95343 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX3O95343 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SIX3O95343 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SIX3O95343 RPL7P26-201ENST00000333817 754 ntBASIC3.46□□□□□ -1.86
SIX3O95343 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SIX3O95343 RNA5SP72-201ENST00000364442 117 ntBASIC3.46□□□□□ -1.86
SIX3O95343 RNU6-1207P-201ENST00000384343 107 ntBASIC3.46□□□□□ -1.86
SIX3O95343 MIR184-201ENST00000384962 84 ntBASIC3.46□□□□□ -1.86
SIX3O95343 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
SIX3O95343 FAT1P1-201ENST00000406588 507 ntBASIC3.46□□□□□ -1.86
SIX3O95343 RPS15AP38-201ENST00000413110 372 ntBASIC3.46□□□□□ -1.86
SIX3O95343 AL008987.1-201ENST00000415528 237 ntBASIC3.46□□□□□ -1.86
SIX3O95343 RPL21P32-201ENST00000419877 477 ntBASIC3.46□□□□□ -1.86
SIX3O95343 AL159169.1-201ENST00000421119 127 ntBASIC3.46□□□□□ -1.86
SIX3O95343 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.46□□□□□ -1.86
SIX3O95343 SNRPEP4-201ENST00000435815 279 ntBASIC3.46□□□□□ -1.86
SIX3O95343 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX3O95343 SETP5-201ENST00000437270 562 ntBASIC3.46□□□□□ -1.86
SIX3O95343 MTCO2P20-201ENST00000437339 673 ntBASIC3.46□□□□□ -1.86
SIX3O95343 HMGN2P20-201ENST00000437531 273 ntBASIC3.46□□□□□ -1.86
SIX3O95343 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX3O95343 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX3O95343 OR6K5P-201ENST00000447050 945 ntBASIC3.46□□□□□ -1.86
SIX3O95343 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX3O95343 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX3O95343 USP9YP10-201ENST00000454868 628 ntBASIC3.46□□□□□ -1.86
SIX3O95343 SNORD11.1-201ENST00000459482 85 ntBASIC3.46□□□□□ -1.86
SIX3O95343 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.46□□□□□ -1.86
SIX3O95343 AP001025.2-201ENST00000490908 477 ntBASIC3.46□□□□□ -1.86
SIX3O95343 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.46□□□□□ -1.86
SIX3O95343 AC021146.8-201ENST00000507455 733 ntBASIC3.46□□□□□ -1.86
SIX3O95343 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.46□□□□□ -1.86
SIX3O95343 AC017037.2-201ENST00000513850 890 ntBASIC3.46□□□□□ -1.86
SIX3O95343 RNU2-27P-201ENST00000516185 142 ntBASIC3.46□□□□□ -1.86
SIX3O95343 RNU6-1231P-201ENST00000517185 103 ntBASIC3.46□□□□□ -1.86
SIX3O95343 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.46□□□□□ -1.86
SIX3O95343 COX6CP8-201ENST00000522620 226 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms