Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 NPM1P41-201ENST00000512920 831 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-2O95096 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.6□□□□□ -1.83
NKX2-2O95096 MTCO1P35-201ENST00000515270 228 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AC026801.2-201ENST00000515352 425 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 RNU2-58P-201ENST00000516403 183 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 RNA5SP309-201ENST00000516670 106 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.6□□□□□ -1.83
NKX2-2O95096 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-2O95096 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-2O95096 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.6□□□□□ -1.83
NKX2-2O95096 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-2O95096 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-2O95096 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.6□□□□□ -1.83
NKX2-2O95096 OR4T1P-201ENST00000554933 911 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.6□□□□□ -1.83
NKX2-2O95096 AC090877.1-201ENST00000561418 344 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AL359999.1-201ENST00000604513 294 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AL049634.3-201ENST00000604968 457 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AC012443.1-201ENST00000605605 231 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AC087752.4-201ENST00000605911 462 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AL355810.1-201ENST00000614629 552 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AC009159.1-201ENST00000618386 642 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AC009878.1-201ENST00000621819 340 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AL138713.1-201ENST00000624026 2130 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AL603839.4-201ENST00000624658 1005 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-2O95096 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-2O95096 AC012020.1-201ENST00000624541 1728 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-2O95096 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-2O95096 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NKX2-2O95096 MTND4P26-201ENST00000415971 1359 ntBASIC3.6□□□□□ -1.83
NKX2-2O95096 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-2O95096 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NKX2-2O95096 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
NKX2-2O95096 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-2O95096 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.6□□□□□ -1.83
NKX2-2O95096 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NKX2-2O95096 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.6□□□□□ -1.83
NKX2-2O95096 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-2O95096 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-2O95096 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.59□□□□□ -1.83
NKX2-2O95096 AC009812.4-201ENST00000569134 1805 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-2O95096 RNA5SP97-201ENST00000365006 84 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-2O95096 Y_RNA.553-201ENST00000384670 102 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 RNU6-754P-201ENST00000391166 107 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 HLFP1-201ENST00000402375 499 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 Y_RNA.598-201ENST00000410480 95 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 RPL21P32-201ENST00000419877 477 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AC010153.1-201ENST00000432862 727 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AC090774.1-201ENST00000435925 246 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 FTH1P1-201ENST00000437933 532 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 RPL22P17-201ENST00000438729 315 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.59□□□□□ -1.83
NKX2-2O95096 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-2O95096 TPT1P14-201ENST00000448018 505 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-2O95096 VN1R17P-201ENST00000472048 1090 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AC114967.1-201ENST00000504890 259 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.59□□□□□ -1.83
NKX2-2O95096 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-2O95096 PAICSP4-201ENST00000517543 1253 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-2O95096 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-2O95096 SNRPGP16-201ENST00000533275 226 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-2O95096 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.59□□□□□ -1.83
NKX2-2O95096 AC007424.1-203ENST00000554613 687 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.59□□□□□ -1.83
NKX2-2O95096 AC120057.2-201ENST00000571520 271 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.59□□□□□ -1.83
NKX2-2O95096 AC068790.3-201ENST00000602988 553 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AC064872.1-201ENST00000604823 1072 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AL451086.1-201ENST00000605596 223 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AC006023.2-201ENST00000609916 167 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 AL450472.3-201ENST00000615578 367 ntBASIC3.59□□□□□ -1.83
NKX2-2O95096 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
NKX2-2O95096 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.59□□□□□ -1.83
NKX2-2O95096 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
NKX2-2O95096 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NKX2-2O95096 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.59□□□□□ -1.84
NKX2-2O95096 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.84
NKX2-2O95096 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.59□□□□□ -1.84
NKX2-2O95096 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.59□□□□□ -1.84
NKX2-2O95096 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NKX2-2O95096 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NKX2-2O95096 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.59□□□□□ -1.84
NKX2-2O95096 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.58□□□□□ -1.84
NKX2-2O95096 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-2O95096 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-2O95096 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
NKX2-2O95096 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-2O95096 RNU6-173P-201ENST00000364215 104 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
NKX2-2O95096 RNU6-213P-201ENST00000384051 104 ntBASIC3.58□□□□□ -1.84
NKX2-2O95096 MIR19A-201ENST00000384878 82 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms