Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
ZIC3O60481 AC011460.1-201ENST00000636268 1834 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
ZIC3O60481 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.59□□□□□ -1.83
ZIC3O60481 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.59□□□□□ -1.83
ZIC3O60481 CCNG1P1-201ENST00000406783 885 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 MIR1251-201ENST00000408552 70 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 SNORA3C-201ENST00000408792 125 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 RNU2-47P-201ENST00000410649 186 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 SPA17P1-201ENST00000416656 452 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ZIC3O60481 C1DP2-201ENST00000418167 426 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.59□□□□□ -1.83
ZIC3O60481 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.59□□□□□ -1.83
ZIC3O60481 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.59□□□□□ -1.83
ZIC3O60481 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
ZIC3O60481 RABEPKP1-201ENST00000440529 1026 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 NANOGNBP1-201ENST00000448444 480 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.59□□□□□ -1.83
ZIC3O60481 AC098824.1-201ENST00000453565 980 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 AC133473.1-201ENST00000455173 299 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.59□□□□□ -1.83
ZIC3O60481 SRRM1P2-201ENST00000464531 1192 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 ST13P14-201ENST00000474095 734 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.59□□□□□ -1.83
ZIC3O60481 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.59□□□□□ -1.83
ZIC3O60481 AC091133.4-201ENST00000511142 308 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 RNU6-430P-201ENST00000517078 107 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 MTND1P5-201ENST00000517906 940 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.59□□□□□ -1.83
ZIC3O60481 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.59□□□□□ -1.83
ZIC3O60481 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ZIC3O60481 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.59□□□□□ -1.83
ZIC3O60481 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.59□□□□□ -1.83
ZIC3O60481 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.59□□□□□ -1.83
ZIC3O60481 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.59□□□□□ -1.83
ZIC3O60481 AC120057.2-201ENST00000571520 271 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.59□□□□□ -1.83
ZIC3O60481 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.59□□□□□ -1.83
ZIC3O60481 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.59□□□□□ -1.83
ZIC3O60481 AC011468.4-201ENST00000603942 409 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 AC055876.5-201ENST00000605667 259 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 AL391813.2-201ENST00000609113 322 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 AC103710.1-201ENST00000610003 901 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
ZIC3O60481 AC010149.2-201ENST00000637608 315 ntBASIC3.59□□□□□ -1.83
ZIC3O60481 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.59□□□□□ -1.83
ZIC3O60481 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
ZIC3O60481 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.59□□□□□ -1.83
ZIC3O60481 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.59□□□□□ -1.84
ZIC3O60481 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.59□□□□□ -1.84
ZIC3O60481 AL133412.1-201ENST00000380194 2992 ntBASIC3.59□□□□□ -1.84
ZIC3O60481 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
ZIC3O60481 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.58□□□□□ -1.84
ZIC3O60481 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ZIC3O60481 AC016588.2-201ENST00000632484 3021 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZIC3O60481 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
ZIC3O60481 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ZIC3O60481 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ZIC3O60481 RNU5A-6P-201ENST00000384136 116 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 MIR93-201ENST00000385024 80 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 MIR513A2-201ENST00000385249 127 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ZIC3O60481 AL583834.1-201ENST00000406943 343 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.58□□□□□ -1.84
ZIC3O60481 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.58□□□□□ -1.84
ZIC3O60481 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.58□□□□□ -1.84
ZIC3O60481 AL391219.1-201ENST00000422570 483 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 MTCO3P30-201ENST00000426425 670 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.58□□□□□ -1.84
ZIC3O60481 NANOGP6-201ENST00000429190 847 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 UBE2V1P13-201ENST00000436983 439 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.58□□□□□ -1.84
ZIC3O60481 AC073614.1-201ENST00000438690 650 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 AC083863.1-201ENST00000438811 231 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 AC069285.2-201ENST00000440210 275 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.58□□□□□ -1.84
ZIC3O60481 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.58□□□□□ -1.84
ZIC3O60481 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.58□□□□□ -1.84
ZIC3O60481 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.58□□□□□ -1.84
ZIC3O60481 AL645939.1-201ENST00000453429 797 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.58□□□□□ -1.84
ZIC3O60481 RPL7P15-201ENST00000461190 712 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ZIC3O60481 RPL9P33-201ENST00000484311 566 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 AC055855.1-201ENST00000489563 579 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 AC012170.1-201ENST00000495139 359 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 AL139099.1-201ENST00000497398 403 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 AL358832.1-201ENST00000497800 389 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 AC025445.1-201ENST00000502728 300 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 AC105252.1-201ENST00000503089 286 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.58□□□□□ -1.84
ZIC3O60481 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
ZIC3O60481 NPM1P41-201ENST00000512920 831 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
ZIC3O60481 RNA5SP154-201ENST00000516193 111 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 Y_RNA.672-201ENST00000516289 104 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 MTCO2P4-201ENST00000517968 247 ntBASIC3.58□□□□□ -1.84
ZIC3O60481 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms