Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPHP1O15259 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPHP1O15259 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
NPHP1O15259 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPHP1O15259 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NPHP1O15259 FRG1CP-201ENST00000358464 769 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 RNU6-50P-201ENST00000362356 103 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NPHP1O15259 AL122016.1-201ENST00000403365 367 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 AL138878.1-201ENST00000405131 347 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 AL008987.1-201ENST00000415528 237 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.42□□□□□ -1.7
NPHP1O15259 SGO1P2-201ENST00000429458 1589 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.42□□□□□ -1.7
NPHP1O15259 MTND1P32-201ENST00000433043 938 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.42□□□□□ -1.7
NPHP1O15259 AC002381.1-201ENST00000447049 280 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 U3.44-201ENST00000458938 192 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 RPL23AP62-201ENST00000463396 453 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 BTF3L4P4-201ENST00000506381 449 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 AC034244.1-201ENST00000507687 207 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.42□□□□□ -1.7
NPHP1O15259 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.42□□□□□ -1.7
NPHP1O15259 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.42□□□□□ -1.7
NPHP1O15259 AC105185.1-201ENST00000518705 535 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPHP1O15259 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.42□□□□□ -1.7
NPHP1O15259 UBE2NP1-201ENST00000545592 458 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC4.42□□□□□ -1.7
NPHP1O15259 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPHP1O15259 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.42□□□□□ -1.7
NPHP1O15259 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.42□□□□□ -1.7
NPHP1O15259 AL606834.2-201ENST00000602954 668 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 BBIP1P1-201ENST00000602999 279 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 AC011468.4-201ENST00000603942 409 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 AP001330.4-201ENST00000604350 154 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 AC135507.2-201ENST00000612443 309 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 MIR7112-201ENST00000616126 65 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 CRYM-AS1-204ENST00000637983 556 ntBASIC4.42□□□□□ -1.7
NPHP1O15259 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.42□□□□□ -1.7
NPHP1O15259 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPHP1O15259 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
NPHP1O15259 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPHP1O15259 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPHP1O15259 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
NPHP1O15259 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
NPHP1O15259 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPHP1O15259 AP000567.1-201ENST00000406413 156 ntBASIC4.41□□□□□ -1.7
NPHP1O15259 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.41□□□□□ -1.7
NPHP1O15259 RPS24P7-201ENST00000416921 246 ntBASIC4.41□□□□□ -1.7
NPHP1O15259 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.41□□□□□ -1.7
NPHP1O15259 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.41□□□□□ -1.7
NPHP1O15259 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.41□□□□□ -1.7
NPHP1O15259 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.41□□□□□ -1.7
NPHP1O15259 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.41□□□□□ -1.7
NPHP1O15259 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC4.41□□□□□ -1.7
NPHP1O15259 EEF1E1P1-201ENST00000446998 430 ntBASIC4.41□□□□□ -1.7
NPHP1O15259 DNAJC19P1-201ENST00000455312 319 ntBASIC4.41□□□□□ -1.7
NPHP1O15259 RPL23AP31-201ENST00000456160 467 ntBASIC4.41□□□□□ -1.7
NPHP1O15259 AC093278.1-201ENST00000494700 600 ntBASIC4.41□□□□□ -1.7
NPHP1O15259 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.41□□□□□ -1.7
NPHP1O15259 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.41□□□□□ -1.7
NPHP1O15259 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.41□□□□□ -1.7
NPHP1O15259 PDCL2P2-201ENST00000533651 189 ntBASIC4.41□□□□□ -1.7
NPHP1O15259 OR6C7P-201ENST00000547875 934 ntBASIC4.41□□□□□ -1.7
NPHP1O15259 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC4.41□□□□□ -1.7
NPHP1O15259 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.41□□□□□ -1.7
NPHP1O15259 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.41□□□□□ -1.7
NPHP1O15259 AL162274.2-201ENST00000614406 332 ntBASIC4.41□□□□□ -1.7
NPHP1O15259 AC007656.2-201ENST00000624902 4547 ntBASIC4.41□□□□□ -1.7
NPHP1O15259 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.41□□□□□ -1.7
NPHP1O15259 AC011477.1-204ENST00000623416 1325 ntBASIC4.41□□□□□ -1.7
NPHP1O15259 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPHP1O15259 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NPHP1O15259 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NPHP1O15259 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.4□□□□□ -1.7
NPHP1O15259 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
NPHP1O15259 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.7
NPHP1O15259 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NPHP1O15259 MIR423-201ENST00000362201 94 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 MIR135A2-201ENST00000384854 100 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NPHP1O15259 BEND7P1-201ENST00000422058 457 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 TXNL1P1-201ENST00000429528 554 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 AL831737.1-201ENST00000441288 271 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.4□□□□□ -1.71
NPHP1O15259 AL671855.1-201ENST00000446875 1203 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.4□□□□□ -1.71
NPHP1O15259 MTND1P31-201ENST00000449206 961 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 RSL24D1P3-201ENST00000449255 495 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC4.4□□□□□ -1.71
NPHP1O15259 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.4□□□□□ -1.71
NPHP1O15259 FAM172BP-201ENST00000487497 1089 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 AC093281.2-201ENST00000510153 597 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.4□□□□□ -1.71
NPHP1O15259 AC017037.2-201ENST00000513850 890 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 SNORA31.8-201ENST00000516327 108 ntBASIC4.4□□□□□ -1.71
NPHP1O15259 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.4□□□□□ -1.71
NPHP1O15259 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.4□□□□□ -1.71
NPHP1O15259 AC099489.2-201ENST00000574976 260 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms