Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RNU6-522P-201ENST00000364497 107 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFXAPO00287 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFXAPO00287 AL359634.1-202ENST00000404721 284 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 PPIAP31-201ENST00000405422 495 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 RNU6-985P-201ENST00000410182 104 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 RNU2-6P-201ENST00000411404 190 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 RPL31P12-201ENST00000422587 358 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.92□□□□□ -1.62
RFXAPO00287 AC002381.1-201ENST00000447049 280 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 RPS24P6-201ENST00000452670 400 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.92□□□□□ -1.62
RFXAPO00287 BTF3P15-201ENST00000455606 336 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 RPS15AP1-201ENST00000457423 391 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 MIR2053-201ENST00000459295 91 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 RNU7-66P-201ENST00000459469 62 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 AC006512.1-201ENST00000468816 291 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 AL163973.1-201ENST00000484753 577 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 AC004062.1-201ENST00000509926 645 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 FAM206BP-201ENST00000510179 541 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC4.92□□□□□ -1.62
RFXAPO00287 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.92□□□□□ -1.62
RFXAPO00287 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.92□□□□□ -1.62
RFXAPO00287 Y_RNA.682-201ENST00000516457 100 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 RNU6-1088P-201ENST00000516850 104 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 OR4R1P-201ENST00000529879 463 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 AC068993.1-201ENST00000546724 589 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.92□□□□□ -1.62
RFXAPO00287 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.92□□□□□ -1.62
RFXAPO00287 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFXAPO00287 RN7SL290P-201ENST00000578661 300 ntBASIC4.92□□□□□ -1.62
RFXAPO00287 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.92□□□□□ -1.62
RFXAPO00287 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.92□□□□□ -1.62
RFXAPO00287 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.92□□□□□ -1.62
RFXAPO00287 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.92□□□□□ -1.62
RFXAPO00287 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFXAPO00287 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFXAPO00287 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
RFXAPO00287 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFXAPO00287 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RFXAPO00287 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.91□□□□□ -1.62
RFXAPO00287 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
RFXAPO00287 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.91□□□□□ -1.62
RFXAPO00287 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RFXAPO00287 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.91□□□□□ -1.62
RFXAPO00287 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RFXAPO00287 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC4.91□□□□□ -1.62
RFXAPO00287 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.91□□□□□ -1.62
RFXAPO00287 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
RFXAPO00287 SNORD37.1-201ENST00000390968 65 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 RNA5SP241-201ENST00000391326 114 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFXAPO00287 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFXAPO00287 GNG5P5-201ENST00000420444 220 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 RPL23AP38-201ENST00000423801 469 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.91□□□□□ -1.62
RFXAPO00287 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.91□□□□□ -1.62
RFXAPO00287 AL049734.2-201ENST00000441066 616 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 MTCO3P10-201ENST00000455912 772 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 CEACAMP4-201ENST00000457676 421 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 AL162395.1-201ENST00000457882 422 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 SCARNA10-201ENST00000459255 330 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 TRBV1-201ENST00000476502 284 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.91□□□□□ -1.62
RFXAPO00287 UBA52P3-201ENST00000491303 382 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.91□□□□□ -1.62
RFXAPO00287 RNU6-513P-201ENST00000516104 104 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 RN7SKP283-201ENST00000517197 270 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 RANP9-201ENST00000519957 271 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.91□□□□□ -1.62
RFXAPO00287 COX6CP8-201ENST00000522620 226 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 AC103843.2-201ENST00000530523 682 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.91□□□□□ -1.62
RFXAPO00287 BNIP3P6-201ENST00000549284 499 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.91□□□□□ -1.62
RFXAPO00287 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.91□□□□□ -1.62
RFXAPO00287 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.91□□□□□ -1.62
RFXAPO00287 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.91□□□□□ -1.62
RFXAPO00287 AL157817.1-201ENST00000614264 790 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.91□□□□□ -1.62
RFXAPO00287 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RFXAPO00287 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFXAPO00287 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFXAPO00287 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFXAPO00287 USP9YP4-201ENST00000424401 1745 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 AC114546.3-201ENST00000623582 1734 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.91□□□□□ -1.62
RFXAPO00287 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFXAPO00287 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RFXAPO00287 SMG1P4-204ENST00000523028 4131 ntBASIC4.91□□□□□ -1.62
RFXAPO00287 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RFXAPO00287 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
RFXAPO00287 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.9□□□□□ -1.62
RFXAPO00287 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RFXAPO00287 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.9□□□□□ -1.62
RFXAPO00287 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.9□□□□□ -1.62
RFXAPO00287 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RFXAPO00287 PCAT14-202ENST00000627127 3935 ntBASIC4.9□□□□□ -1.62
RFXAPO00287 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RFXAPO00287 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms