Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC023347.2-201ENST00000433994 462 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL645638.1-201ENST00000440519 361 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL135938.1-201ENST00000443141 297 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 NPM1P49-201ENST00000448027 714 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 MRPL42P4-201ENST00000453267 443 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC118282.2-201ENST00000508739 374 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC110760.3-202ENST00000515177 371 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 MTND2P32-201ENST00000521584 1038 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 COX6CP8-201ENST00000522620 226 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC007536.1-201ENST00000533382 349 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL157394.1-201ENST00000562983 1224 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL049838.1-201ENST00000563647 981 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 EIF5A2P1-201ENST00000564027 460 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 BPTFP1-201ENST00000579209 492 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC026790.2-201ENST00000606282 430 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AP000238.1-201ENST00000608759 426 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC027449.1-201ENST00000608890 407 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL359535.1-201ENST00000612100 1087 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL138478.1-201ENST00000612252 832 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 VN1R74P-201ENST00000613259 503 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL158163.2-201ENST00000619110 700 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 LRRC77P-213ENST00000637727 880 ntBASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.85□□□□□ -1.95
TMX2-CTNND1H3BSU7 API5P2-201ENST00000397055 1498 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL161431.1-201ENST00000618966 4205 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 ZNF29P-201ENST00000225587 168 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 RNU6-707P-201ENST00000364647 95 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 RNU6-301P-201ENST00000384277 107 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL079342.2-201ENST00000403367 482 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL031121.1-201ENST00000406553 254 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 RNU6-584P-201ENST00000410350 95 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 RNU6-272P-201ENST00000411028 104 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 MTND4P3-201ENST00000417829 541 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC063976.3-201ENST00000426849 329 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 Z93242.1-201ENST00000427102 353 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 MTCYBP32-201ENST00000427945 1084 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 RPL21P112-201ENST00000434403 463 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL662791.1-201ENST00000441992 928 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL606517.1-201ENST00000446914 387 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC233982.1-201ENST00000451247 436 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 NECAP1P2-201ENST00000455668 727 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 RN7SL429P-201ENST00000479090 223 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 GAPDHP39-201ENST00000481866 979 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 RN7SL489P-201ENST00000486185 223 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 RN7SL327P-201ENST00000488659 223 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC011352.3-201ENST00000505162 593 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 TPT1P8-201ENST00000510120 555 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 MTND2P26-201ENST00000528255 1029 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 MTND1P8-201ENST00000571424 950 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC112220.2-201ENST00000605513 533 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AL583856.2-201ENST00000606298 543 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 RNU4-5P-201ENST00000607255 135 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 RN7SL853P-201ENST00000617250 223 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC121761.2-201ENST00000617300 689 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 AC023510.2-201ENST00000622162 746 ntBASIC2.84□□□□□ -1.95
TMX2-CTNND1H3BSU7 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.84□□□□□ -1.96
TMX2-CTNND1H3BSU7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.96
TMX2-CTNND1H3BSU7 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.84□□□□□ -1.96
TMX2-CTNND1H3BSU7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
TMX2-CTNND1H3BSU7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
TMX2-CTNND1H3BSU7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
TMX2-CTNND1H3BSU7 AC004925.1-201ENST00000624256 2706 ntBASIC2.84□□□□□ -1.96
TMX2-CTNND1H3BSU7 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TMX2-CTNND1H3BSU7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
TMX2-CTNND1H3BSU7 SNORA7.2-201ENST00000364446 145 ntBASIC2.83□□□□□ -1.96
TMX2-CTNND1H3BSU7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.83□□□□□ -1.96
TMX2-CTNND1H3BSU7 Y_RNA.472-201ENST00000384322 102 ntBASIC2.83□□□□□ -1.96
TMX2-CTNND1H3BSU7 SNORD116-23-201ENST00000384645 92 ntBASIC2.83□□□□□ -1.96
TMX2-CTNND1H3BSU7 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
TMX2-CTNND1H3BSU7 AL445529.1-201ENST00000398713 389 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms