Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.59□□□□□ -2.16
COL6A5A8TX70 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.59□□□□□ -2.16
COL6A5A8TX70 AC068305.1-201ENST00000497406 726 ntBASIC1.59□□□□□ -2.16
COL6A5A8TX70 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC1.59□□□□□ -2.16
COL6A5A8TX70 AC087441.2-201ENST00000529141 262 ntBASIC1.59□□□□□ -2.16
COL6A5A8TX70 AC107918.3-201ENST00000533272 382 ntBASIC1.59□□□□□ -2.16
COL6A5A8TX70 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.59□□□□□ -2.16
COL6A5A8TX70 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 AL138799.3-201ENST00000438968 350 ntBASIC1.58□□□□□ -2.16
COL6A5A8TX70 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 AC055876.1-202ENST00000567053 138 ntBASIC1.58□□□□□ -2.16
COL6A5A8TX70 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
COL6A5A8TX70 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 AL391987.6-201ENST00000305671 199 ntBASIC1.58□□□□□ -2.16
COL6A5A8TX70 SNORA51.4-201ENST00000364993 124 ntBASIC1.58□□□□□ -2.16
COL6A5A8TX70 RNU6-35P-201ENST00000384530 107 ntBASIC1.58□□□□□ -2.16
COL6A5A8TX70 RNU2-22P-201ENST00000411266 212 ntBASIC1.58□□□□□ -2.16
COL6A5A8TX70 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 BX322784.1-201ENST00000455793 1077 ntBASIC1.58□□□□□ -2.16
COL6A5A8TX70 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 AC025281.1-201ENST00000567026 265 ntBASIC1.58□□□□□ -2.16
COL6A5A8TX70 AC083760.1-201ENST00000589621 670 ntBASIC1.58□□□□□ -2.16
COL6A5A8TX70 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL6A5A8TX70 GTF2H2B-203ENST00000508065 1432 ntBASIC1.58□□□□□ -2.16
COL6A5A8TX70 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 DBF4P1-201ENST00000412976 1892 ntBASIC1.58□□□□□ -2.16
COL6A5A8TX70 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
COL6A5A8TX70 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.58□□□□□ -2.16
COL6A5A8TX70 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL6A5A8TX70 RNU6-328P-201ENST00000390887 106 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 VN1R31P-201ENST00000417498 730 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL6A5A8TX70 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 AC104564.1-201ENST00000493028 407 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 AC019159.1-201ENST00000605094 187 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 DCAF13P1-201ENST00000495256 1330 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 AC008432.1-201ENST00000615912 1320 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
COL6A5A8TX70 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 AC013470.3-201ENST00000420252 1194 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 AC017099.1-201ENST00000448261 1028 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 POU5F1P7-201ENST00000508759 541 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 AC007336.1-201ENST00000576365 3828 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 AC006254.3-201ENST00000603353 884 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 MIR6132-201ENST00000622083 109 ntBASIC1.57□□□□□ -2.16
COL6A5A8TX70 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC1.57□□□□□ -2.16
COL6A5A8TX70 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL6A5A8TX70 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
COL6A5A8TX70 Y_RNA.167-201ENST00000363735 109 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 Y_RNA.274-201ENST00000364714 101 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 SNORA79B-201ENST00000410557 148 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 RN7SKP123-201ENST00000410732 291 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 AC234782.4-201ENST00000417646 1048 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 AC092185.1-201ENST00000491371 97 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 RPL23AP55-201ENST00000498163 452 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 SNORA70.14-201ENST00000516205 110 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 RN7SKP60-201ENST00000516985 239 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 IGKV2D-36-201ENST00000518643 226 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 AL389895.1-201ENST00000554127 252 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 AL512598.1-201ENST00000610158 273 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 AC093909.5-201ENST00000621839 1799 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 AL035405.1-201ENST00000400795 710 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 NDUFS5P3-201ENST00000450668 321 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
COL6A5A8TX70 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 OR7K1P-201ENST00000546439 926 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 DNAJC8P1-201ENST00000554535 372 ntBASIC1.56□□□□□ -2.16
COL6A5A8TX70 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.56□□□□□ -2.16
COL6A5A8TX70 MYL12BP1-201ENST00000569826 507 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms