Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RPEP2-201ENST00000432149 701 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AL662791.1-201ENST00000441992 928 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AC112653.1-201ENST00000443851 386 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 HMGN1P10-201ENST00000474557 553 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 S100A11P1-201ENST00000477525 312 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 TMED11P-201ENST00000479478 690 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 COX7A2P2-201ENST00000505291 250 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 SNORA18.6-201ENST00000516792 115 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 RNU6-201P-201ENST00000517100 61 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AP003385.6-201ENST00000531603 374 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 RAB11AP2-201ENST00000545905 639 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AL157394.1-201ENST00000562983 1224 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AC053481.4-201ENST00000583164 216 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AC004853.1-201ENST00000604902 698 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AC006329.2-201ENST00000611491 394 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AC090970.3-201ENST00000612566 866 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AC091925.2-201ENST00000625059 256 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 MTND5P26-201ENST00000426018 1752 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 AL354685.2-201ENST00000448218 1447 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 FAM91A3P-201ENST00000456826 2544 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.11□□□□□ -1.75
CCDC187A0A096LP49 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 FARSBP1-201ENST00000435808 1778 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AL672167.1-203ENST00000641299 2975 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 RNA5SP130-201ENST00000364431 114 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 RNU1-63P-201ENST00000383902 164 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 SNORD51-201ENST00000384320 80 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 MIR708-201ENST00000390708 88 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AL590002.1-201ENST00000406554 418 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 FCF1P10-201ENST00000407590 479 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 RN7SKP159-201ENST00000410657 292 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 CYCSP19-201ENST00000411715 316 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 SPA17P1-201ENST00000416656 452 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 C1DP2-201ENST00000418167 426 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 ELOCP18-201ENST00000434209 337 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC108734.1-201ENST00000439549 399 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 RABEPKP1-201ENST00000440529 1026 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AL645939.1-201ENST00000453429 797 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 VN1R105P-201ENST00000486595 910 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 DEFB109F-201ENST00000491870 277 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AL358832.1-201ENST00000497800 389 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC105252.1-201ENST00000503089 286 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 RNU6-27P-201ENST00000516146 107 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 RNA5SP73-201ENST00000516744 108 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 RN7SKP116-201ENST00000516902 319 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC078795.3-201ENST00000602913 472 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AL354984.3-201ENST00000604803 325 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC098614.4-201ENST00000607601 462 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 OR10AB1P-201ENST00000609613 938 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC010133.1-201ENST00000615809 842 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC091905.2-201ENST00000623143 306 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC040168.1-201ENST00000623594 991 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 AC092125.1-201ENST00000562568 1995 ntBASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC187A0A096LP49 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms