Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 CCNG2P1-201ENST00000549521 1000 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 MED28P6-201ENST00000558776 231 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 MTND6P33-201ENST00000571794 183 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AL121834.1-201ENST00000572284 509 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC006116.10-201ENST00000591836 581 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AL353600.1-201ENST00000608148 251 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC091304.9-201ENST00000612091 226 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC024941.1-201ENST00000612250 334 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC019278.1-201ENST00000623516 479 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 MIR3653-201ENST00000625572 110 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 AC015813.6-201ENST00000624409 5808 ntBASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.81□□□□□ -1.64
COL4A3BPQ9Y5P4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 RNU1-108P-201ENST00000362556 161 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 U8.3-201ENST00000363321 132 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 SNORA23-201ENST00000365128 182 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AL583835.1-201ENST00000399570 407 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 RNA5SP129-201ENST00000410276 118 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 RN7SKP159-201ENST00000410657 292 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 HMGB1P12-201ENST00000438594 598 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 GAPDHP17-201ENST00000449858 1001 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AC105137.1-201ENST00000484355 562 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 RPL35P6-201ENST00000490024 372 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AC010587.1-201ENST00000505809 469 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 PARP4P3-201ENST00000510265 317 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 PHBP17-201ENST00000528576 541 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AL354984.3-201ENST00000604803 325 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 NDUFA8P1-201ENST00000605525 367 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AP002826.1-201ENST00000608835 315 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AL391813.2-201ENST00000609113 322 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AC008121.2-201ENST00000614647 523 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 AL392088.2-201ENST00000637607 285 ntBASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
COL4A3BPQ9Y5P4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 SDAD1P2-201ENST00000441308 2028 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 RNY3P13-201ENST00000365542 102 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 HSPE1P26-201ENST00000405341 275 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 MIR1290-201ENST00000408735 78 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 RBMY1KP-201ENST00000423480 476 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 RPL27AP8-201ENST00000424277 446 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC092017.2-201ENST00000427600 362 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 DLGAP5P1-201ENST00000430307 464 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC009961.2-201ENST00000435771 251 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 RPL26P6-201ENST00000440913 438 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 USP9YP15-201ENST00000442391 422 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 MTCO3P45-201ENST00000443036 613 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AL512326.1-201ENST00000443050 721 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AL136380.1-201ENST00000447970 162 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 ABCF2P2-201ENST00000450549 296 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC079804.1-201ENST00000461922 436 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC008481.1-201ENST00000463278 396 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC022795.1-201ENST00000473808 480 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 RPS4XP13-201ENST00000483219 789 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 RN7SL691P-201ENST00000494487 301 ntBASIC4.79□□□□□ -1.64
COL4A3BPQ9Y5P4 AC108475.1-201ENST00000507880 950 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms