Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 MIR200C-201ENST00000384980 68 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 Z98941.1-201ENST00000407764 100 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 RNU2-15P-201ENST00000410692 191 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 RNU4-78P-201ENST00000410940 126 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 MTATP6P27-201ENST00000416987 621 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 MTND4LP11-201ENST00000422184 280 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AL389915.1-201ENST00000422463 466 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 RWDD4P2-201ENST00000426392 563 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC104651.1-201ENST00000427559 735 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 PSMA6P3-201ENST00000428242 164 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 ATP5HP2-201ENST00000433885 485 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AL356535.1-201ENST00000440335 398 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 DNAJC19P1-201ENST00000455312 319 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC093899.1-201ENST00000457984 376 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC091564.1-201ENST00000464563 479 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC069499.1-201ENST00000489433 509 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 RPL29P14-201ENST00000495837 428 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 CDC42P4-201ENST00000510507 563 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 RNU7-143P-201ENST00000516781 65 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AP002748.2-201ENST00000528671 348 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 MTCYBP41-201ENST00000528913 1123 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC091489.2-201ENST00000566263 604 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC053481.3-201ENST00000577881 843 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC012417.1-201ENST00000582307 1039 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AL669831.4-202ENST00000590817 238 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 BBIP1P1-201ENST00000602999 279 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC008739.3-201ENST00000603262 127 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AP000403.1-201ENST00000603349 851 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC110741.2-201ENST00000605278 268 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC006329.2-201ENST00000611491 394 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC004825.2-201ENST00000616634 455 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 MIR6075-201ENST00000620782 95 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 AC004009.2-201ENST00000623016 728 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 TEX21P-201ENST00000447107 1476 ntBASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.03□□□□□ -1.76
NCKIPSDQ9NZQ3 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AC116667.1-201ENST00000604855 2072 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 HSPE1P12-201ENST00000412576 301 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 TPMTP2-201ENST00000414372 726 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AL022238.1-201ENST00000442557 355 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AC006011.1-201ENST00000442758 349 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 PAXBP1P1-201ENST00000449315 447 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AP000797.1-201ENST00000478870 387 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 MTND5P4-201ENST00000514978 288 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 MIR5685-201ENST00000579080 79 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AC083760.1-201ENST00000589621 670 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AC091805.2-201ENST00000603848 235 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AL451044.1-201ENST00000604867 238 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AP002360.4-201ENST00000606980 481 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 U6atac.1-201ENST00000616025 117 ntBASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
NCKIPSDQ9NZQ3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
NCKIPSDQ9NZQ3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
NCKIPSDQ9NZQ3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.01□□□□□ -1.77
NCKIPSDQ9NZQ3 AC095050.2-201ENST00000510748 1458 ntBASIC4.01□□□□□ -1.77
NCKIPSDQ9NZQ3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NCKIPSDQ9NZQ3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NCKIPSDQ9NZQ3 MIR423-201ENST00000362201 94 ntBASIC4.01□□□□□ -1.77
NCKIPSDQ9NZQ3 Y_RNA.6-201ENST00000362350 114 ntBASIC4.01□□□□□ -1.77
NCKIPSDQ9NZQ3 SNORD35B-201ENST00000363660 87 ntBASIC4.01□□□□□ -1.77
NCKIPSDQ9NZQ3 RNU6-952P-201ENST00000391164 108 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms