Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS11Q9H270 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS11Q9H270 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
VPS11Q9H270 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.7□□□□□ -1.66
VPS11Q9H270 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
VPS11Q9H270 AL133243.3-201ENST00000617415 3004 ntBASIC4.7□□□□□ -1.66
VPS11Q9H270 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
VPS11Q9H270 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS11Q9H270 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
VPS11Q9H270 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS11Q9H270 ZFRP1-201ENST00000457579 2970 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS11Q9H270 AP001350.1-201ENST00000601906 1524 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 OR5J1P-201ENST00000313544 939 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 RPL23AP57-201ENST00000332361 466 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 RNU6-1309P-201ENST00000363305 108 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 RNU6-1322P-201ENST00000364309 107 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS11Q9H270 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS11Q9H270 RNU1-106P-201ENST00000384382 164 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 RNU6-505P-201ENST00000384427 107 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 MIR124-3-201ENST00000384866 87 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AC068050.1-201ENST00000394891 380 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AL590762.2-201ENST00000395798 571 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS11Q9H270 DHFRP6-201ENST00000401776 268 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AL121972.1-201ENST00000402023 252 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 RPL5P18-201ENST00000406671 891 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS11Q9H270 AC245054.2-201ENST00000415639 319 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS11Q9H270 OR2B7P-201ENST00000429302 934 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS11Q9H270 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS11Q9H270 AC109583.1-201ENST00000432156 268 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 HMGB3P12-201ENST00000438745 556 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS11Q9H270 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS11Q9H270 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS11Q9H270 RNU7-136P-201ENST00000458819 69 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 RNU6-1208P-201ENST00000459588 107 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 RPS26P28-201ENST00000470806 348 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 MTND1P3-201ENST00000484956 952 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AL163540.1-201ENST00000485382 386 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 RPS3AP50-201ENST00000487064 803 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS11Q9H270 AC083829.1-201ENST00000503756 657 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS11Q9H270 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.69□□□□□ -1.66
VPS11Q9H270 RNU6-150P-201ENST00000516237 95 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 RN7SKP147-201ENST00000517154 244 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS11Q9H270 AC107953.1-201ENST00000522216 297 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS11Q9H270 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS11Q9H270 PHBP17-201ENST00000528576 541 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.69□□□□□ -1.66
VPS11Q9H270 AC100770.1-201ENST00000532310 322 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AC013828.2-201ENST00000532487 235 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS11Q9H270 AC023050.3-201ENST00000541142 333 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS11Q9H270 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.69□□□□□ -1.66
VPS11Q9H270 AC034105.3-201ENST00000565294 442 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 MTND6P33-201ENST00000571794 183 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 MIR5699-201ENST00000578903 90 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 MIR4307-201ENST00000582802 84 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AC022726.1-201ENST00000587475 207 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS11Q9H270 AL512605.2-201ENST00000592972 256 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AC112187.2-201ENST00000604345 283 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AC021646.1-201ENST00000605469 484 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AC007390.2-201ENST00000606229 3803 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 CR381572.2-201ENST00000624852 397 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 AC100810.6-201ENST00000638068 285 ntBASIC4.69□□□□□ -1.66
VPS11Q9H270 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS11Q9H270 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
VPS11Q9H270 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.69□□□□□ -1.66
VPS11Q9H270 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
VPS11Q9H270 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
VPS11Q9H270 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
VPS11Q9H270 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.69□□□□□ -1.66
VPS11Q9H270 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
VPS11Q9H270 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS11Q9H270 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
VPS11Q9H270 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
VPS11Q9H270 Y_RNA.202-201ENST00000364083 110 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 Y_RNA.315-201ENST00000365117 102 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS11Q9H270 Y_RNA.481-201ENST00000384373 102 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 U3.30-201ENST00000391308 210 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 AL162578.1-201ENST00000406202 378 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS11Q9H270 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 RNU2-39P-201ENST00000410604 198 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.68□□□□□ -1.66
VPS11Q9H270 AL645608.4-201ENST00000423619 154 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 RPL35AP12-201ENST00000425362 338 ntBASIC4.68□□□□□ -1.66
VPS11Q9H270 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.68□□□□□ -1.66
VPS11Q9H270 RPL21P91-201ENST00000429231 479 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms