Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 AC024589.1-201ENST00000512207 263 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 AC008837.2-201ENST00000513076 418 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 RNU6-1282P-201ENST00000516735 96 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 RNU6-1231P-201ENST00000517185 103 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 AC007991.1-201ENST00000522680 631 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 AC021451.1-201ENST00000523498 1129 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 HIGD1AP1-201ENST00000550979 275 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 AC022146.1-201ENST00000595307 847 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 HSPE1P7-201ENST00000604681 321 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 AC107294.3-201ENST00000609211 526 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 AL450472.3-201ENST00000615578 367 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 ZNF542P-204ENST00000482727 1305 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 AC011477.1-204ENST00000623416 1325 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 AC008669.1-201ENST00000565823 2178 ntBASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CHMP4AQ9BY43 AL049781.1-201ENST00000623195 3585 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 RNU6-97P-201ENST00000363387 104 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 RNA5SP322-201ENST00000363617 119 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 Y_RNA.472-201ENST00000384322 102 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 MIR23B-201ENST00000384832 97 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 ERHP2-201ENST00000402323 299 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 HSPE1P8-201ENST00000406997 288 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 MIR1284-201ENST00000408337 120 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 MTND1P21-201ENST00000412991 285 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AL139421.1-201ENST00000423010 169 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 HSPD1P21-201ENST00000436541 245 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AL109741.2-201ENST00000455561 343 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 DUXAP4-201ENST00000603046 613 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AL158211.4-201ENST00000606988 584 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AC004852.3-201ENST00000614131 326 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AL158163.2-201ENST00000619110 700 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AC244258.1-201ENST00000637553 1071 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AL445984.1-201ENST00000637834 659 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AC092447.10-201ENST00000620607 1652 ntBASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.66□□□□□ -1.66
CHMP4AQ9BY43 AC010680.1-201ENST00000590024 3590 ntBASIC4.65□□□□□ -1.66
CHMP4AQ9BY43 GABRG2-229ENST00000641017 3628 ntBASIC4.65□□□□□ -1.66
CHMP4AQ9BY43 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.65□□□□□ -1.66
CHMP4AQ9BY43 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CHMP4AQ9BY43 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 RNA5SP119-201ENST00000362715 117 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 MIR7-3-201ENST00000384898 110 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 MIR218-2-201ENST00000385006 110 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 RPL7P46-201ENST00000425129 740 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AC108734.1-201ENST00000439549 399 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AC112198.1-201ENST00000505369 1220 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 BTF3L4P4-201ENST00000506381 449 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 RNU6-714P-201ENST00000516963 103 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 DUXAP2-201ENST00000519198 589 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AC093331.1-201ENST00000521474 169 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AC124947.2-202ENST00000552735 133 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 ACTR3BP3-201ENST00000565577 979 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 MIR4429-201ENST00000580105 73 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 MIR486-1-201ENST00000612171 68 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 AC013476.2-201ENST00000614456 459 ntBASIC4.65□□□□□ -1.67
CHMP4AQ9BY43 RPS4XP5-202ENST00000449995 1334 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms