Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.88□□□□□ -1.79
NPAS1Q99742 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.88□□□□□ -1.79
NPAS1Q99742 AL049734.2-201ENST00000441066 616 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 NANOGNBP1-201ENST00000448444 480 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 RPS17P13-201ENST00000448974 407 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 UBDP1-202ENST00000457888 382 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 RN7SL303P-201ENST00000469773 251 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AP000926.1-201ENST00000479573 241 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AC010587.1-201ENST00000505809 469 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AC008958.1-201ENST00000511047 682 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.88□□□□□ -1.79
NPAS1Q99742 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPAS1Q99742 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.88□□□□□ -1.79
NPAS1Q99742 AC007424.1-203ENST00000554613 687 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AL109766.1-201ENST00000555080 552 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AL360157.1-201ENST00000565962 87 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AC007599.1-201ENST00000568688 1174 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AL391840.1-201ENST00000571144 367 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.88□□□□□ -1.79
NPAS1Q99742 MIR4284-201ENST00000578924 81 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 MIR3146-201ENST00000580367 79 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 KC877982.1-201ENST00000602313 470 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AL161729.4-201ENST00000604650 476 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 ARF4P1-201ENST00000605447 541 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AC233309.1-201ENST00000619522 751 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AC103858.2-201ENST00000621471 543 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AL161637.1-201ENST00000622380 412 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 AC068880.5-201ENST00000624331 290 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.88□□□□□ -1.79
NPAS1Q99742 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.88□□□□□ -1.79
NPAS1Q99742 OR5AK4P-201ENST00000635912 903 ntBASIC3.88□□□□□ -1.79
NPAS1Q99742 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPAS1Q99742 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
NPAS1Q99742 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPAS1Q99742 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NPAS1Q99742 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPAS1Q99742 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.88□□□□□ -1.79
NPAS1Q99742 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPAS1Q99742 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPAS1Q99742 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPAS1Q99742 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.87□□□□□ -1.79
NPAS1Q99742 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NPAS1Q99742 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPAS1Q99742 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NPAS1Q99742 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPAS1Q99742 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NPAS1Q99742 RNU1-14P-201ENST00000362759 152 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 RNU6-637P-201ENST00000384050 107 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 RPL23AP26-201ENST00000412728 464 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 ELOCP17-201ENST00000414751 326 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 RAD23BP2-201ENST00000416003 1207 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.87□□□□□ -1.79
NPAS1Q99742 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.87□□□□□ -1.79
NPAS1Q99742 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.87□□□□□ -1.79
NPAS1Q99742 C4BPAP2-201ENST00000428434 478 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.87□□□□□ -1.79
NPAS1Q99742 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPAS1Q99742 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.87□□□□□ -1.79
NPAS1Q99742 AL358934.1-201ENST00000432346 324 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 FTH1P1-201ENST00000437933 532 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 TPT1P14-201ENST00000448018 505 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 ABCF2P2-201ENST00000450549 296 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.87□□□□□ -1.79
NPAS1Q99742 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.87□□□□□ -1.79
NPAS1Q99742 RPS3AP50-201ENST00000487064 803 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.87□□□□□ -1.79
NPAS1Q99742 AC106872.2-201ENST00000494303 480 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AC104164.2-201ENST00000496953 495 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AC010493.1-201ENST00000513479 292 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.87□□□□□ -1.79
NPAS1Q99742 AC026801.2-201ENST00000515352 425 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.87□□□□□ -1.79
NPAS1Q99742 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.87□□□□□ -1.79
NPAS1Q99742 AC023575.1-201ENST00000580510 358 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.87□□□□□ -1.79
NPAS1Q99742 MIR3118-1-201ENST00000581787 76 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AC005255.1-201ENST00000593748 216 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AP001429.1-201ENST00000602568 530 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 MIR98-201ENST00000606724 119 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AC004492.1-201ENST00000607036 742 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AL391813.2-201ENST00000609113 322 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AC006338.2-201ENST00000616864 791 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AL732618.1-201ENST00000623251 301 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AC019278.1-201ENST00000623516 479 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 AC091953.2-201ENST00000623979 160 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 SEPT14P19-203ENST00000633205 211 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
NPAS1Q99742 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
NPAS1Q99742 LINC02471-203ENST00000641941 4752 ntBASIC3.87□□□□□ -1.79
NPAS1Q99742 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPAS1Q99742 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
NPAS1Q99742 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPAS1Q99742 RNA5SP366-201ENST00000365454 123 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 RNU6-1181P-201ENST00000384191 106 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.86□□□□□ -1.79
NPAS1Q99742 MTND1P21-201ENST00000412991 285 ntBASIC3.86□□□□□ -1.79
NPAS1Q99742 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPAS1Q99742 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms