Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AL049697.2-201ENST00000403708 294 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 RN7SKP16-201ENST00000410180 299 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 RN7SKP106-201ENST00000410832 272 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 RNU6-370P-201ENST00000411008 104 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 TBCAP2-201ENST00000416175 326 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AC104333.2-201ENST00000422630 192 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AC016831.4-201ENST00000438302 307 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AC012181.1-201ENST00000479895 423 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 RNU6-988P-201ENST00000519081 107 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AC018630.1-201ENST00000541376 925 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AC133555.2-201ENST00000550213 292 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AC010424.2-201ENST00000607594 443 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AL031666.3-201ENST00000609320 1006 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 FAM27B-201ENST00000610601 213 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 MIR6716-201ENST00000613413 80 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AC244517.12-201ENST00000623581 663 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AL450345.1-202ENST00000605741 3881 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 AC004817.4-201ENST00000602396 3625 ntBASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
SYNGAP1Q96PV0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AL022322.2-201ENST00000624072 20397 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AL590240.1-201ENST00000334118 313 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 Y_RNA.133-201ENST00000363428 110 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 Y_RNA.401-201ENST00000383965 117 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-641P-201ENST00000384006 107 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-907P-201ENST00000390924 102 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AL024474.1-201ENST00000404655 591 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 RNA5SP345-201ENST00000410646 108 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 TIMM9P1-201ENST00000436122 256 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 UBE2V1P13-201ENST00000436983 439 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AL358232.1-201ENST00000448030 501 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AC000111.2-201ENST00000448200 210 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 FAM206BP-201ENST00000510179 541 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 RPL39P5-202ENST00000512505 151 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 COX6CP5-201ENST00000527162 228 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AP000763.2-201ENST00000540641 163 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 SNRPGP18-201ENST00000553000 214 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 ELL2P4-201ENST00000446870 1376 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 MTND4P1-201ENST00000457501 1466 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AC066616.2-201ENST00000559334 1481 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AC100778.3-201ENST00000580060 1750 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SYNGAP1Q96PV0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-1252P-201ENST00000363054 104 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 Y_RNA.197-201ENST00000364004 102 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 Y_RNA.301-201ENST00000364990 103 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 RNU6-38P-201ENST00000384085 107 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 MIR514A2-201ENST00000385131 88 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 MIR514A3-201ENST00000385132 88 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 U3.20-201ENST00000390909 217 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 AC068533.1-201ENST00000418542 415 ntBASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.51□□□□□ -1.53
SYNGAP1Q96PV0 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms