Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AL139418.1-201ENST00000613613 177 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 MIR8058-201ENST00000615737 89 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC009268.2-201ENST00000621925 457 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC244258.1-201ENST00000637553 1071 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC007656.2-201ENST00000624902 4547 ntBASIC3.52□□□□□ -1.85
VPS33AQ96AX1 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
VPS33AQ96AX1 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 RPS3AP26-201ENST00000398259 784 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 AL136116.1-201ENST00000403591 381 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 FAT1P1-201ENST00000406588 507 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 MTCO1P17-201ENST00000411522 491 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 MTND1P21-201ENST00000412991 285 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 PPP1R11P2-201ENST00000423543 382 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 RNA5SP310-201ENST00000459084 116 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 AC034159.1-201ENST00000513885 583 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 SETP2-201ENST00000553886 926 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 AC024560.3-201ENST00000608482 349 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 AC072039.2-201ENST00000608883 439 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 MIR6716-201ENST00000613413 80 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 MIR6076-201ENST00000617521 113 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 AC243312.2-201ENST00000623340 601 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 AL159972.1-201ENST00000625150 448 ntBASIC3.51□□□□□ -1.85
VPS33AQ96AX1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
VPS33AQ96AX1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 MFSD8-236ENST00000641509 4050 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 RPL21P132-201ENST00000331267 462 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AL672167.1-206ENST00000356293 943 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 RNA5SP42-201ENST00000364278 115 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 SNORA56-201ENST00000383966 129 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 RNU6-723P-201ENST00000383973 107 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 RNU6-637P-201ENST00000384050 107 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 SNORA1.3-201ENST00000384676 136 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 RNU6-1077P-201ENST00000410506 102 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 COX6CP17-201ENST00000421389 185 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AL022400.1-201ENST00000423946 935 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 OR4K11P-201ENST00000431829 904 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 NDUFB4P6-201ENST00000436819 366 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 UBE2V1P13-201ENST00000436983 439 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 RSU1P2-202ENST00000437884 485 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AP000542.1-201ENST00000448473 371 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 MRPS31P2-201ENST00000451581 518 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AL359385.1-201ENST00000456509 365 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 RPS7P7-201ENST00000463499 571 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC106872.3-201ENST00000495104 446 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 FCF1P3-201ENST00000496394 590 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC022447.3-201ENST00000506865 495 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 PCBP2P3-201ENST00000509726 843 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 SNORA31.22-201ENST00000517204 135 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC068587.4-201ENST00000533893 186 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 UBE2NP1-201ENST00000545592 458 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC023161.2-201ENST00000551218 780 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC125611.2-201ENST00000551907 647 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC034268.2-201ENST00000571784 482 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC011260.1-201ENST00000578420 472 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC013244.3-201ENST00000605614 388 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC004067.1-201ENST00000608733 700 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC009464.1-201ENST00000615731 469 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 AC079597.1-201ENST00000624306 508 ntBASIC3.5□□□□□ -1.85
VPS33AQ96AX1 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms