Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 TPMTP1-201ENST00000592307 737 ntBASIC3.24□□□□□ -1.89
TOPBP1Q92547 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.24□□□□□ -1.89
TOPBP1Q92547 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
TOPBP1Q92547 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TOPBP1Q92547 SAR1AP2-201ENST00000392696 594 ntBASIC3.23□□□□□ -1.89
TOPBP1Q92547 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.23□□□□□ -1.89
TOPBP1Q92547 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.23□□□□□ -1.89
TOPBP1Q92547 Y_RNA.670-201ENST00000516255 105 ntBASIC3.23□□□□□ -1.89
TOPBP1Q92547 FAM92A1P1-201ENST00000528023 890 ntBASIC3.23□□□□□ -1.89
TOPBP1Q92547 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.23□□□□□ -1.89
TOPBP1Q92547 RPS3AP4-201ENST00000555161 764 ntBASIC3.23□□□□□ -1.89
TOPBP1Q92547 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.23□□□□□ -1.89
TOPBP1Q92547 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
TOPBP1Q92547 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.22□□□□□ -1.89
TOPBP1Q92547 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.22□□□□□ -1.89
TOPBP1Q92547 CEACAMP4-201ENST00000457676 421 ntBASIC3.22□□□□□ -1.89
TOPBP1Q92547 AC104564.1-201ENST00000493028 407 ntBASIC3.22□□□□□ -1.89
TOPBP1Q92547 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.22□□□□□ -1.89
TOPBP1Q92547 TRMT112P2-201ENST00000512910 132 ntBASIC3.22□□□□□ -1.89
TOPBP1Q92547 AC067805.1-201ENST00000559344 470 ntBASIC3.22□□□□□ -1.89
TOPBP1Q92547 AC234775.3-201ENST00000564612 656 ntBASIC3.22□□□□□ -1.89
TOPBP1Q92547 AC090897.3-201ENST00000636973 1157 ntBASIC3.22□□□□□ -1.89
TOPBP1Q92547 BX005019.1-201ENST00000561881 1810 ntBASIC3.22□□□□□ -1.89
TOPBP1Q92547 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
TOPBP1Q92547 ATP5F1P1-201ENST00000433775 569 ntBASIC3.21□□□□□ -1.9
TOPBP1Q92547 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.21□□□□□ -1.9
TOPBP1Q92547 IFNWP4-201ENST00000453148 294 ntBASIC3.21□□□□□ -1.9
TOPBP1Q92547 AP000926.1-201ENST00000479573 241 ntBASIC3.21□□□□□ -1.9
TOPBP1Q92547 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TOPBP1Q92547 MLLT10P2-201ENST00000506434 249 ntBASIC3.21□□□□□ -1.9
TOPBP1Q92547 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.21□□□□□ -1.9
TOPBP1Q92547 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC3.21□□□□□ -1.9
TOPBP1Q92547 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.21□□□□□ -1.9
TOPBP1Q92547 AC010546.1-201ENST00000569391 485 ntBASIC3.21□□□□□ -1.9
TOPBP1Q92547 FAM106CP-201ENST00000582212 507 ntBASIC3.21□□□□□ -1.9
TOPBP1Q92547 AL161912.3-201ENST00000605404 628 ntBASIC3.21□□□□□ -1.9
TOPBP1Q92547 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
TOPBP1Q92547 AP000275.1-201ENST00000411943 390 ntBASIC3.2□□□□□ -1.9
TOPBP1Q92547 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.2□□□□□ -1.9
TOPBP1Q92547 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.2□□□□□ -1.9
TOPBP1Q92547 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.2□□□□□ -1.9
TOPBP1Q92547 MTND2P2-201ENST00000434633 945 ntBASIC3.2□□□□□ -1.9
TOPBP1Q92547 YWHAZP7-201ENST00000436906 631 ntBASIC3.2□□□□□ -1.9
TOPBP1Q92547 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.2□□□□□ -1.9
TOPBP1Q92547 RPS7P5-201ENST00000441482 581 ntBASIC3.2□□□□□ -1.9
TOPBP1Q92547 CLIC4P1-201ENST00000453177 535 ntBASIC3.2□□□□□ -1.9
TOPBP1Q92547 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.2□□□□□ -1.9
TOPBP1Q92547 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.2□□□□□ -1.9
TOPBP1Q92547 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.2□□□□□ -1.9
TOPBP1Q92547 AC020895.1-201ENST00000595362 272 ntBASIC3.2□□□□□ -1.9
TOPBP1Q92547 AC116447.1-201ENST00000613153 453 ntBASIC3.2□□□□□ -1.9
TOPBP1Q92547 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TOPBP1Q92547 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
TOPBP1Q92547 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
TOPBP1Q92547 SET-203ENST00000372688 801 ntTSL 2 BASIC3.19□□□□□ -1.9
TOPBP1Q92547 RNU6-328P-201ENST00000390887 106 ntBASIC3.19□□□□□ -1.9
TOPBP1Q92547 SNORA67.5-201ENST00000391036 107 ntBASIC3.19□□□□□ -1.9
TOPBP1Q92547 MIR1294-201ENST00000408503 142 ntBASIC3.19□□□□□ -1.9
TOPBP1Q92547 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.19□□□□□ -1.9
TOPBP1Q92547 AC114982.2-201ENST00000461396 358 ntBASIC3.19□□□□□ -1.9
TOPBP1Q92547 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.19□□□□□ -1.9
TOPBP1Q92547 SNORA25.15-201ENST00000516487 89 ntBASIC3.19□□□□□ -1.9
TOPBP1Q92547 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.19□□□□□ -1.9
TOPBP1Q92547 AC068790.3-201ENST00000602988 553 ntBASIC3.19□□□□□ -1.9
TOPBP1Q92547 LRRC77P-213ENST00000637727 880 ntBASIC3.19□□□□□ -1.9
TOPBP1Q92547 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TOPBP1Q92547 AC011155.1-201ENST00000316512 456 ntBASIC3.19□□□□□ -1.9
TOPBP1Q92547 RNU4-7P-201ENST00000364758 141 ntBASIC3.19□□□□□ -1.9
TOPBP1Q92547 AC099336.2-201ENST00000422457 254 ntBASIC3.19□□□□□ -1.9
TOPBP1Q92547 MTCO3P30-201ENST00000426425 670 ntBASIC3.19□□□□□ -1.9
TOPBP1Q92547 HMGB1P31-201ENST00000437242 427 ntBASIC3.19□□□□□ -1.9
TOPBP1Q92547 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
TOPBP1Q92547 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.19□□□□□ -1.9
TOPBP1Q92547 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.19□□□□□ -1.9
TOPBP1Q92547 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.19□□□□□ -1.9
TOPBP1Q92547 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.19□□□□□ -1.9
TOPBP1Q92547 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.18□□□□□ -1.9
TOPBP1Q92547 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.18□□□□□ -1.9
TOPBP1Q92547 AL590084.1-201ENST00000407885 387 ntBASIC3.18□□□□□ -1.9
TOPBP1Q92547 AC027124.2-201ENST00000428249 105 ntBASIC3.18□□□□□ -1.9
TOPBP1Q92547 CASP3P1-201ENST00000446037 609 ntBASIC3.18□□□□□ -1.9
TOPBP1Q92547 RNU7-95P-201ENST00000459222 64 ntBASIC3.18□□□□□ -1.9
TOPBP1Q92547 RPS29P12-201ENST00000460178 152 ntBASIC3.18□□□□□ -1.9
TOPBP1Q92547 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC3.18□□□□□ -1.9
TOPBP1Q92547 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.18□□□□□ -1.9
TOPBP1Q92547 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.18□□□□□ -1.9
TOPBP1Q92547 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.18□□□□□ -1.9
TOPBP1Q92547 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.18□□□□□ -1.9
TOPBP1Q92547 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.18□□□□□ -1.9
TOPBP1Q92547 AC092326.2-201ENST00000624772 1561 ntBASIC3.17□□□□□ -1.9
TOPBP1Q92547 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TOPBP1Q92547 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.17□□□□□ -1.9
TOPBP1Q92547 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.17□□□□□ -1.9
TOPBP1Q92547 ELOCP10-201ENST00000440624 327 ntBASIC3.17□□□□□ -1.9
TOPBP1Q92547 MTCO1P42-201ENST00000457379 726 ntBASIC3.17□□□□□ -1.9
TOPBP1Q92547 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
TOPBP1Q92547 AC055855.1-201ENST00000489563 579 ntBASIC3.17□□□□□ -1.9
TOPBP1Q92547 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.17□□□□□ -1.9
TOPBP1Q92547 OR4T1P-201ENST00000554933 911 ntBASIC3.17□□□□□ -1.9
TOPBP1Q92547 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms