Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 Z99714.1-201ENST00000450463 807 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC008280.2-201ENST00000455473 307 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 RN7SL636P-201ENST00000497504 294 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 OR5H5P-201ENST00000503164 928 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC008885.2-201ENST00000509506 930 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 RNU6-711P-201ENST00000517255 106 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 OR4A45P-201ENST00000529954 901 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC139103.1-201ENST00000534696 1030 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AC012119.1-201ENST00000603184 222 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 MIR1264-201ENST00000616374 69 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AL359757.2-201ENST00000624309 274 ntBASIC2.44□□□□□ -2.02
LMX1AQ8TE12 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
LMX1AQ8TE12 AP006437.1-201ENST00000641440 3685 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 RNU6-837P-201ENST00000391056 108 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 SNORA3.2-201ENST00000408221 125 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AC092745.2-202ENST00000411880 369 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 PNRC2P1-201ENST00000423940 420 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 NANOGP5-201ENST00000424456 877 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AL121890.1-201ENST00000435457 205 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 HIGD1AP2-201ENST00000446367 280 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 RPL36AP33-201ENST00000450395 310 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AC093392.2-201ENST00000450682 337 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 TPRKBP1-201ENST00000456243 481 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 RN7SKP282-201ENST00000516824 299 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AC107954.1-201ENST00000565906 727 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AC034268.2-201ENST00000571784 482 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AC040174.2-201ENST00000602701 465 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AL009028.1-201ENST00000604895 802 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 AC024595.1-201ENST00000623088 387 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 MTND4P8-201ENST00000514997 1362 ntBASIC2.43□□□□□ -2.02
LMX1AQ8TE12 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.43□□□□□ -2.02
LMX1AQ8TE12 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 Z82195.2-201ENST00000612348 18351 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 ENSAP3-201ENST00000312710 333 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 RNU1-100P-201ENST00000365255 165 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AL359511.1-201ENST00000402970 211 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AL158825.1-201ENST00000414735 521 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 OFD1P18Y-201ENST00000420889 959 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AC005189.1-201ENST00000431286 310 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 MTND4LP7-201ENST00000431728 294 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 RPL23AP74-201ENST00000437246 471 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AL513321.1-201ENST00000441175 761 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AL035407.2-201ENST00000454090 378 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 RPS27AP9-201ENST00000477681 438 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 RNF138P1-201ENST00000502765 546 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 YWHAEP4-201ENST00000505390 198 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 RNU6-362P-201ENST00000516736 90 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AL442163.2-201ENST00000553912 710 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AL355836.1-201ENST00000555951 870 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 OR4G1P-201ENST00000588632 938 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AC107871.2-201ENST00000612894 502 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AC068831.7-201ENST00000616954 363 ntBASIC2.42□□□□□ -2.02
LMX1AQ8TE12 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.42□□□□□ -2.02
LMX1AQ8TE12 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms